| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2203 |
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| Symbol | |
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| ID | 8420059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2505665 |
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| End bp | 2506642 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038802 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_003199065 |
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| Protein GI | 258406323 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCCG GTAAGGCCGG CCCGCAGCTG GAACGACTCG GCCGGGTACC CTGGCCGCGA
CAGGACAACG AGGCCACGGA CGCCAAGGCC GAACGCCTCC GCCAATTGTG GCAGGCGCTG
GAACTCAAAG ACAAAGTCGT CACTTCCTCA ATGGCCGGAC ACGCCGTGAT TGTGAAGCGC
GTGCGCTTCG CCAAGGACAG GATCCGACAC CTCGCCGCCG AAGTCCAGAA AGAGGCGAAG
CAATACATCC CCTTCGATAT CAACGACGTC TACCTCGACT TCCAGGATCT GGGACCTGAA
TCGGAACAGG CGGGGTTCCA TCAGGTTTTG CTGGTGGCCA GCAAGAAAAA GATGGTCCAC
GAGGTCCAAA ATGTGCTCTC GGCAGCCGGG CTGGGATTGT CGGTTCTGGA TGTCGATGCC
TTTGCGCTGA CCAATTGTTT TACCTTCAAT TATCCTGAGT GGAGCGACAA ACCGACCTAT
CTGCTCGATA TCGGCGCCCA GCAGTCCGTC TTTTGCGTTT GTGCTCAAGG GCGTCCTCTG
TTTTTACGCG AAATCGCATT TGGCGGACAT CAGATCACCG AACGGTTGGC GCGGACGTTG
GAGATTACCA AAACCGAGGC TGAAAAACTC AAAGTCAACG GTCCCAAGGA GGAGGACGCG
AGCAATATCG CCACCGTCCA GGATGTCTTG AATAAGGTGT TTGCCGATTG GGCCCAGGAA
ATCCAGCGCA TGCTCACTTT TTACCAATCC TCGGAAAGCG GCGGATTGAC GTCGACGCGG
ATGCTCCTAT CCGGCGGCGG AAGTCTTATT TCCGGTTTAC CTGAGCGGTT TGCCGAACGA
TTGGAGATGG AGGTCGGGCT TCTCGATCCT TTCCGGCGGA TCAATATCTC GCCGAATCTT
TTCGATCGAA ATTATCTGAC TCGCACCGGG CCGCAGTTTG CGGTGGGCAC GGGGCTTGCC
CTGCGACAAG CCGTATAG
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| Protein sequence | MVPGKAGPQL ERLGRVPWPR QDNEATDAKA ERLRQLWQAL ELKDKVVTSS MAGHAVIVKR
VRFAKDRIRH LAAEVQKEAK QYIPFDINDV YLDFQDLGPE SEQAGFHQVL LVASKKKMVH
EVQNVLSAAG LGLSVLDVDA FALTNCFTFN YPEWSDKPTY LLDIGAQQSV FCVCAQGRPL
FLREIAFGGH QITERLARTL EITKTEAEKL KVNGPKEEDA SNIATVQDVL NKVFADWAQE
IQRMLTFYQS SESGGLTSTR MLLSGGGSLI SGLPERFAER LEMEVGLLDP FRRINISPNL
FDRNYLTRTG PQFAVGTGLA LRQAV
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