| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2201 |
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| Symbol | |
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| ID | 8420057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2504470 |
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| End bp | 2505087 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038800 |
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| Product | Tfp pilus assembly protein PilO-like protein |
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| Protein accession | YP_003199063 |
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| Protein GI | 258406321 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGC CAGATTCGAA AAGTCTCCTG AGCCGGTATG AGGCTGTGCC GCGTAAGCGC
CGCATTCTCC TTTTTGTCCT GCTCCTTGCG GCTGTGGCTG GCGCGTATTG GTACTTTCTG
TTCCAGCCCC AATGGGAACA ACGGCAGGCC CACCACAAGA CGATCCAGGA GCTCGATTCC
CAGATCGCCA CGTATCAGAC GAAAATCGCG CGCTTGCCTG AGATCGAGAA GAATCTCGCC
AAGCGGCAGC GAGAATGGAC GTATGCGCAA TCCCTTTTGC CGGAGAGCAG CCAGGAAGTG
GAGGAGTTGC TCGCTTCCAT CGAACGGTTG GGCAAGGATG TTGGGGTCGA ATTCTTGCTT
TTCGCCCCCG GCCGGGAAGA GGTGCAACAA TTTTACGCCT CCCGTAATGT CGACGTGCGC
CTCCGGGGGC AATTTCACAG TCTGATGCGC TTTTTCAGCC GCCTTTCTCA TCTGGACCGC
TTGGTTCGGC TGGAAAGCCT GCGCCTGCGG CCCCAGGGCA AAGGGGAGCA GCTTGAACTG
GCTGTGGACA GCGATATCTC CATGTACCGT GCTTTGACAG AGGCTGAGAT CGCCGCGCGG
GATGCAAAGA AGCAATAG
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| Protein sequence | MAKPDSKSLL SRYEAVPRKR RILLFVLLLA AVAGAYWYFL FQPQWEQRQA HHKTIQELDS
QIATYQTKIA RLPEIEKNLA KRQREWTYAQ SLLPESSQEV EELLASIERL GKDVGVEFLL
FAPGREEVQQ FYASRNVDVR LRGQFHSLMR FFSRLSHLDR LVRLESLRLR PQGKGEQLEL
AVDSDISMYR ALTEAEIAAR DAKKQ
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