Gene Dret_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2175 
Symbol 
ID8420026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2472818 
End bp2473108 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID645038769 
Productchaperonin Cpn10 
Protein accessionYP_003199037 
Protein GI258406295 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.95289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA AACCGCTGCA CGACCGCGTT CTTGTCAAAC GCGTCCAGGA AGAAGAAACC 
ACCAAGGGCG GCATCATCAT CCCCGACACC GCCAAGGAAA AGCCCATCAA AGGCGAAATC
GTGGCTGCCG GTCCGGGCAA GGTCGCTGAT GACGGCAAGC GCATCGAAAT GACCGTCAAG
ACCGGGGACA AGGTCATGTT CAACAAATAT GCCGGCACGG AAGTCAAGAT CGACGGCGAG
GAATTCCTCG TTATGCGCGA AGACGACATC CTGGCCACCA TTGAAGACTA A
 
Protein sequence
MNLKPLHDRV LVKRVQEEET TKGGIIIPDT AKEKPIKGEI VAAGPGKVAD DGKRIEMTVK 
TGDKVMFNKY AGTEVKIDGE EFLVMREDDI LATIED