| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2169 |
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| Symbol | |
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| ID | 8420020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2465043 |
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| End bp | 2467619 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038763 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_003199031 |
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| Protein GI | 258406289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGC TTCAAATTTA TAGCGTTATC CCCAAACTTC CCACTGCCCT CCAGCCGCTT
TGGGAGCTGG CCTACAATGT CTGGTATGAT TGGAAACACG AAATCTGGGA CTTCTTCTCC
CAGATAGACC ACGCTTTATG GCAGGAATGC CAGAACAACC CGGTACTCTT TCTCAATCGT
CTGCCCCAGC CCACCCTGGA GGAATTGGCC CAGGACACCT TTTTTGTTGA CCGCCTGCAC
GAGATCCACA CCAGCTTGCG TGAATACCTG ACCACCTCCT CGGAACATGT CATCTTCGAC
CACGCCCGGA CCGGGCAGCC TGTGGTCGCC TACTTCAGTG CCGAATACGG GCTGAGTCAC
AGCATACCGA TCTATTCTGG AGGATTGGGC ATACTCGCCG GGGACCATCT CAAATCAGCC
AGCGATCTGA ATCTTCCGCT GGTCGGGATC GGACTGGCCT ACCAGCATGG CTATTTCCGG
CAATACCTGA CCCCAGACGG CTGGCAACAG GAAAGGTATC CGGTCAACGA TTTCGAACAA
CTCCCTATGT CGCTGGTCCA GACAGAGCAC GGCGCCCCGC TGCTCGTCCA TGTCCCCGTC
AAGGAGCGCT CCCTGGCCGC CCGGGTCTGG CGCATCAACG TGGGCCGGAT TGCCCTGTAT
CTGCTCGACG CCAATACTCC GGAAAACCCG CGTGAACTCA GAGATCTGAC CTCCCGCCTC
TATGGCGGCG GGGATGAAAT GCGGCTCCAG CAGGAAATTC TCCTGGGCAT CGGCGGAATC
CGCCTGCTTC GACAGCTTGA TCTCTCTCCG GATGTCATCC ACTTGAATGA GGGGCACTCG
GCCTTTGCGG GGCTGGAACG CATTCGGGAT CTGATGCGCG ACAAGGGCTT GCCCTTTGAA
GCGGCCAAAG AGGTCGTAGC CTCGAGTTCC GTGTTCACCA CACACACACC GGTTCCGGCC
GGAAACGACC GCTTTGCACC GCCCATGATC CGGGAATATT TTCAGTCCTA CAGCCAGGAA
TTGCGTCTCT CTCACGAAGC CTTCCTCGGC TTGGGCAGAG AAAACCCCTC GGACGAACAT
GAAACTTTCT GCATGACCGT ACTGGCCCTG AATCTCTCCC GCTTCAACAA CGGGGTCAGC
AAGCGCCATG GCGAAGTCTC GCGCACCATG TGGCGCCGCA ACTGGCCCCA ATACCCCGTG
GAAGACGTCC CCATCGGATC CATCACCAAT GGAGTGCATA TTTCCTCCTG GGTCTCACGG
GATTTTGCCC TGCTCTTTGA CCGCTACCTG GGCTCGAATT GGCGGGAAGA TCCTGATTGC
GACCGGCTCT GGCGCCAGGG CGAGGCTATT CCGGACACTG AACTGTGGCG GACACATATC
CGGCTCAAGG AACAACTCGT GGATTTTGTC CGTGAACGGC TCAAACAGCA GGTTCTGGCT
CGGAGTGGCC GCCCCCGGGA GGCACTGCTG GCTGAGGAGG TCCTCGATCC CGCTGTGCTG
ACCATCGGCT TTGGCCGCCG CTTTGCGACT TACAAGCGCG CGGACCTGCT CTTTCGCGAC
ACCCAGCGGC TGATCGCCCT GCTCAATGAC ACCGAACAGC CGATCCAGCT CATTTTTTCC
GGCAAAGCCC ACCCCCGGGA CAACGAAGGG AAACGGCTGA TCCAAAAAAT CGTGGAGCTC
TCGCAGTCTG AGGAATGCCG GCACCGCCTC GTCTTCCTCG AGGACTACGA CATGGAGATC
GCCCGCCATC TCCTGCAGGG GTGCGACGTC TGGCTCAACA CCCCGCGCCC CCCGCTTGAG
GCGTGCGGCA CCAGTGGCAT GAAAGCTGCT GCCAACGGGG TCCTGGTGGC CAGCACCCTG
GACGGCTGGT GGGGCGAGGC CTACAAAAGC GACAATAGCC TCGGCTGGTC CATTGGACGC
GGCGAGGTCT ATGACGACCC CGAATACCAG GATTTCGTCG AAAGCCAGAT CATCTATCAA
CTTTTGGAAA AAGATATCAT CCCGCTCTTT TACGATCGCG GCAAAGGCAA TATCCCCCGG
GAATGGATAC GGCGCATGAA AAAAGGGCTC ATGGAGCTGG TACCCCGCTT CAACGCCCAT
CGCATGGTTG AAGAATACGC CAAATTCGCC TATCAGCCGG CACATACCAA TTACCACAGC
CTGTCCAGCG AAGATTTCCA GGCGGCGCGG AATCTGGCCA GCTGGCGTCT CTCCGTGGCC
GAGAAATGGG GGTCATTGAG TTTACGCAAT GTCCGCGCAG CAGAACAAAG CGAAGTCTTT
GTCGAACAGG GGATCGAGGT TCAGGCCGAA GTCTATCTGG ACGGGTTGAG CCCCGAGGAG
GTCCGGGTGG AGATCTACGC TGGCCCCCTT AACCCGGAAG GGCAGTTCAT CCGGCGCACG
ACCTCCTTGA TGACCTCGGT CCAGGTCCTG GAAGACGGCT GGCATCTGTA CAAGGGCACC
ACGAAACCAG CGGAGAGCGG CCGTTTCGGA TTTACGGTTC GTCTTCTGCC GCACTACCCC
TTGGCAATGG ACCCCCACGC CGTAGGCCTC ATCCGTTGGG CGGTACAAGG CAAATAG
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| Protein sequence | MQPLQIYSVI PKLPTALQPL WELAYNVWYD WKHEIWDFFS QIDHALWQEC QNNPVLFLNR
LPQPTLEELA QDTFFVDRLH EIHTSLREYL TTSSEHVIFD HARTGQPVVA YFSAEYGLSH
SIPIYSGGLG ILAGDHLKSA SDLNLPLVGI GLAYQHGYFR QYLTPDGWQQ ERYPVNDFEQ
LPMSLVQTEH GAPLLVHVPV KERSLAARVW RINVGRIALY LLDANTPENP RELRDLTSRL
YGGGDEMRLQ QEILLGIGGI RLLRQLDLSP DVIHLNEGHS AFAGLERIRD LMRDKGLPFE
AAKEVVASSS VFTTHTPVPA GNDRFAPPMI REYFQSYSQE LRLSHEAFLG LGRENPSDEH
ETFCMTVLAL NLSRFNNGVS KRHGEVSRTM WRRNWPQYPV EDVPIGSITN GVHISSWVSR
DFALLFDRYL GSNWREDPDC DRLWRQGEAI PDTELWRTHI RLKEQLVDFV RERLKQQVLA
RSGRPREALL AEEVLDPAVL TIGFGRRFAT YKRADLLFRD TQRLIALLND TEQPIQLIFS
GKAHPRDNEG KRLIQKIVEL SQSEECRHRL VFLEDYDMEI ARHLLQGCDV WLNTPRPPLE
ACGTSGMKAA ANGVLVASTL DGWWGEAYKS DNSLGWSIGR GEVYDDPEYQ DFVESQIIYQ
LLEKDIIPLF YDRGKGNIPR EWIRRMKKGL MELVPRFNAH RMVEEYAKFA YQPAHTNYHS
LSSEDFQAAR NLASWRLSVA EKWGSLSLRN VRAAEQSEVF VEQGIEVQAE VYLDGLSPEE
VRVEIYAGPL NPEGQFIRRT TSLMTSVQVL EDGWHLYKGT TKPAESGRFG FTVRLLPHYP
LAMDPHAVGL IRWAVQGK
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