Gene Dret_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2164 
Symbol 
ID8420015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2460515 
End bp2460934 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID645038758 
ProductNucleoside-diphosphate kinase 
Protein accessionYP_003199026 
Protein GI258406284 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.961833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC AGACTTTATC GATCATCAAA CCTGATGCCG TTGAGCGCGG CCTGACCGGC 
ACCATCCTGG CCCGGATTCA AGACGCGGGG TTGCGGCTGG TAGCGCTCAA AATGCTCCAC
CTCGACACAA CCGAGGCTGA AGCCTTCTAC GCCGTGCACA AAGACAAGCC GTTTTTTGGC
AGCTTGACCT CGTACATGTC CTCCGGCCCC ATCGTTGTGG CTGTTTTAGA GGGCGAAAAC
GCCATCAGCC GCTATCGGGA TCTGATGGGA GCCACCAATC CGGAAAAGGC AGCAGAGGGC
ACCTTGCGCA AAACCTTCGC TGTCGACCTC GAACGCAATT CCGTGCACGG CTCCGACGCA
CCGGAAACCG CGGCCACAGA AATTGCCTAT TTCTTTAATC AATTGGAGCT TGTGGGATGA
 
Protein sequence
MTQQTLSIIK PDAVERGLTG TILARIQDAG LRLVALKMLH LDTTEAEAFY AVHKDKPFFG 
SLTSYMSSGP IVVAVLEGEN AISRYRDLMG ATNPEKAAEG TLRKTFAVDL ERNSVHGSDA
PETAATEIAY FFNQLELVG