Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2164 |
Symbol | |
ID | 8420015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2460515 |
End bp | 2460934 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038758 |
Product | Nucleoside-diphosphate kinase |
Protein accession | YP_003199026 |
Protein GI | 258406284 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.961833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAC AGACTTTATC GATCATCAAA CCTGATGCCG TTGAGCGCGG CCTGACCGGC ACCATCCTGG CCCGGATTCA AGACGCGGGG TTGCGGCTGG TAGCGCTCAA AATGCTCCAC CTCGACACAA CCGAGGCTGA AGCCTTCTAC GCCGTGCACA AAGACAAGCC GTTTTTTGGC AGCTTGACCT CGTACATGTC CTCCGGCCCC ATCGTTGTGG CTGTTTTAGA GGGCGAAAAC GCCATCAGCC GCTATCGGGA TCTGATGGGA GCCACCAATC CGGAAAAGGC AGCAGAGGGC ACCTTGCGCA AAACCTTCGC TGTCGACCTC GAACGCAATT CCGTGCACGG CTCCGACGCA CCGGAAACCG CGGCCACAGA AATTGCCTAT TTCTTTAATC AATTGGAGCT TGTGGGATGA
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Protein sequence | MTQQTLSIIK PDAVERGLTG TILARIQDAG LRLVALKMLH LDTTEAEAFY AVHKDKPFFG SLTSYMSSGP IVVAVLEGEN AISRYRDLMG ATNPEKAAEG TLRKTFAVDL ERNSVHGSDA PETAATEIAY FFNQLELVG
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