Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2159 |
Symbol | |
ID | 8420010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2454927 |
End bp | 2456195 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038753 |
Product | carboxyl-terminal protease |
Protein accession | YP_003199021 |
Protein GI | 258406279 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.272376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTGA GCCATTGGCT GGGTATTGTG GCACTCCTGG CCCTTTTGAC CGCCACTCCC GGGCCGGGGC AGGCCACGGA CGCCAATCGA TTCGAGTCCC TGAAACGCTT CAGCCAGGTT ATGGATCTGA TCGAAAAGAG CTATGTCCGG GACATCGACC GGGAAGAACT CATCACCGGG GCCCTGAAAG GGATGCTCAG CGAGCTCGAC CCCCATTCAG CATACATGTC CCCCGACTCC TTCCAGGAGA TGCAGGTGGA GACCTCTGGG GAATTCAACG GCATTGGCAT ACAGATTTCC ATGGAAAACG GACGATTGAC CGTTGTCTCT CCTATCGAGG ACACCCCGGC CTACGAGGCA GGCTTTGAGG CCGGCGACAT CATCATGGAG ATCAACGGCG AATCGACCCA GGATATCACC TTGATGGAGG CGGTGAAAAA AATCCGCGGG CCCAAGGGCA GCACGGTCGA TCTCAAGGTC CTGCACCCCG AGGCCCAGAA ACCGGAAACA ATCACTGTCA AACGGGACAC CATCCCCTTG GAATCGGTCA AATCCGAACC GCTGGGTGGC GGCTATCTCT ACCTCAGGGT CACCAATTTC CAGGAAAAGA CCACCGAGGA TCTGCAAAAG GCCTTGCACA AACGCGACGG CCGTCTCGCG GGCGCGATTT TGGACCTGCG CAACAACCCC GGAGGCCTTT TACCCCAGGC TGTCTCTGTC GCCGACACCT TTCTCAAGGA AGGGAAGATC GTCTACACCG AGGGCAAGGT CAAAAATGCC AAAATGGAAT TTTCGGCCCA GAAGCAGCAA TCCGACATCG ATGTGCCGCT GATCGTCCTT ATCAATCCCG GTTCAGCCTC GGCTTCCGAG ATTGTCGCCG GGGCCCTTCA GGACCAGCAA CGCGCCGTGA TCCTCGGCGA ACGGTCCTTT GGCAAGGGCT CCGTCCAAAC GGTCATCCCC CTGACAGACG GCTCGGGCAT CAAATTGACC ACGGCGCTGT ACTACACCCC GAATGGCCGT TCGATTCAGG CCGAAGGGAT CATTCCAGAC ATCGTGGTTC CCTTTTCTCC GCCACAGGAG ACCAACGGCA CCGCCCGCCC GATTCTCCGG GAACAGGATC TCACCAGGCA CTTGGAACAA ACCGAGAATC CGGAACACGA CTCGGTCAAA CGCAGCGACA AGGCCAAAGA GATGCTCGAA AAAGACAATC AACTCCGAAT GGCGCTGCAA CTCGTCAAGA GCCTGCCCCG CCTCCGGAAA ATCCAATAA
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Protein sequence | MRLSHWLGIV ALLALLTATP GPGQATDANR FESLKRFSQV MDLIEKSYVR DIDREELITG ALKGMLSELD PHSAYMSPDS FQEMQVETSG EFNGIGIQIS MENGRLTVVS PIEDTPAYEA GFEAGDIIME INGESTQDIT LMEAVKKIRG PKGSTVDLKV LHPEAQKPET ITVKRDTIPL ESVKSEPLGG GYLYLRVTNF QEKTTEDLQK ALHKRDGRLA GAILDLRNNP GGLLPQAVSV ADTFLKEGKI VYTEGKVKNA KMEFSAQKQQ SDIDVPLIVL INPGSASASE IVAGALQDQQ RAVILGERSF GKGSVQTVIP LTDGSGIKLT TALYYTPNGR SIQAEGIIPD IVVPFSPPQE TNGTARPILR EQDLTRHLEQ TENPEHDSVK RSDKAKEMLE KDNQLRMALQ LVKSLPRLRK IQ
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