| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2138 |
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| Symbol | |
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| ID | 8419988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2437847 |
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| End bp | 2438527 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038731 |
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| Product | single-stranded nucleic acid binding R3H domain protein |
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| Protein accession | YP_003199000 |
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| Protein GI | 258406258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.101522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA TGAGGGAATT CGAAGGCAAA AGTGTTGACG CAGCCATTGA AGATGCCTGT
GCCCATTTTG GTAAAGAACG CGACGCCCTG GAGGTCGAAA TCCTTGATGG AGGATCGAGC
GGGATATTCG GGCTCGGCAG CCGCAAGGCG CGGGTCCAGG CCAAGCCGAG ACAAAATCTC
GGGCAATTGG AAGGGCTGAT CCGTGATGTC GTGTCCCAGA TTCTGACGCC CATCATCGGG
GAGACCGAAT TGAAGATTGA TGTCCAGCAG GACCCGGTCA CAGTGGAGAT TCAGGATCAG
GACAATTCCG GTTTGATTAT CGGACGGGAT GGGAAGACGA TTTCCTCGCT GCAATATCTG
GTCAACCGTA TTCTGGCCAA ACGGTGGCCG GAGCGGGTCC GGGTCCAATT GGATGCTGGT
GATTATCGGG AACGGCAGAC GGAGAATCTG CGCAAGACAG CCTTGTTTTT GTCCCGGAAA
GCCAAGGATT CCGGCCGGGT TCAAAGCACG CGGCCCATGT CCTCGTACCA CCGCCGGGTG
GTGCATATGG CCTTGCAGAA CGAGCAGGAC ATCAATACCA GGAGCAAGGG CGACGGCCCC
ATGAAACGGG TGCTGATTAT GCCCAAGCGG GACCGGAAGC GTTCCAATGA TAACGCCGCC
GCCCAACAGT ACGAGTCCTG A
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| Protein sequence | MSEMREFEGK SVDAAIEDAC AHFGKERDAL EVEILDGGSS GIFGLGSRKA RVQAKPRQNL
GQLEGLIRDV VSQILTPIIG ETELKIDVQQ DPVTVEIQDQ DNSGLIIGRD GKTISSLQYL
VNRILAKRWP ERVRVQLDAG DYRERQTENL RKTALFLSRK AKDSGRVQST RPMSSYHRRV
VHMALQNEQD INTRSKGDGP MKRVLIMPKR DRKRSNDNAA AQQYES
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