| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2121 |
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| Symbol | |
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| ID | 8419971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2411966 |
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| End bp | 2412916 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038714 |
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| Product | ABC transporter related |
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| Protein accession | YP_003198983 |
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| Protein GI | 258406241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.67463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTA GGGTAGAAGG GGTCAGCCAC AGTTTCGAGG GCCAGCCTGT ACTCACCGAC
ATCACCTGCG GCTTTCGCCA GGGAGAGTTA TTTTCCCTGG TTGGACCGTC GGGAGCGGGA
AAAACCACTC TGCTCTCCCT CATCGCCGGG CTGCTATCGC CCCAAGCCGG AACAATCCGG
TATGCCCAGA CACCGGATCT GAATGCCCCG ATTATTCTCG TCTATCAGGA TTTCATTCTT
TTCCCCCACC TGACAGTGGC CGACAACGTC GGCTTCGGCC TGAAAGCCCG CAAGTGGAGC
CGGGCCACCC GCCGGAACCG GGTGGAGCAG ATGTTGCGCT ATTTCCAGCT CGAAGACAAA
GCAGACGCCT TTCCCGCCCA GCTTTCTGGA GGACAGCGGC AGCGGGTGGC GATCGCTCGA
GCCATGGTTG TCTCCCCCGC GATCTTGCTC CTCGACGAAC CATTCGCCAA TCTCGACCGC
AGCTTGAAAA TGGAAACCGC CCGGTTCATC CGGTCCACAC AGCGCGAATT CGGGATGACC
ACTGTGGCCG TGACCCACGA TCTGGAGGAA GCCTTTGCCA TGTCGGACCG CCTCGGCATC
CTTTTAAACG GCAGACTACG ACAAGTCGGC CCCCCCCGGG AGGTCTACTT CCACCCCCAG
GATCTCGAAG TGGCCCGTTT CTTGGGGCCG GTGAACCCCC TGACCCCTGC CACCACGGCC
GATCTCCTCC CGCCCGGAAC AGATAGTCCG TCCAAGGCCT CCTTTATCCG CCCGGAGGCC
CTGGAAGTCG AAGGCGATGC CAACGGGCCC GGATGCATTC GGGATATCCA TTTCGCTGGG
CATTACATCA TGTACACAAT TGACTTGCGG GGGCAGGAAA TCATCGTCTA CAGTCAGCAG
CGGGTATTGG AAATTGGGCA ACGGGTGCGG GTGCGTGCCG TCCAGGCATA G
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| Protein sequence | MDFRVEGVSH SFEGQPVLTD ITCGFRQGEL FSLVGPSGAG KTTLLSLIAG LLSPQAGTIR
YAQTPDLNAP IILVYQDFIL FPHLTVADNV GFGLKARKWS RATRRNRVEQ MLRYFQLEDK
ADAFPAQLSG GQRQRVAIAR AMVVSPAILL LDEPFANLDR SLKMETARFI RSTQREFGMT
TVAVTHDLEE AFAMSDRLGI LLNGRLRQVG PPREVYFHPQ DLEVARFLGP VNPLTPATTA
DLLPPGTDSP SKASFIRPEA LEVEGDANGP GCIRDIHFAG HYIMYTIDLR GQEIIVYSQQ
RVLEIGQRVR VRAVQA
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