| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2083 |
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| Symbol | |
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| ID | 8419933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2373307 |
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| End bp | 2374377 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645038676 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_003198945 |
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| Protein GI | 258406203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000963425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCCA AGTTGGATAG CATTGAAGAG CGTTACGCCG AAATCGAACA GGAACTGAGT
TCGAGCGATG TCCTGCAGGA TCAGCAACGC TATGCGGAGC TGGCCAAGGC CCACGCCGAC
CTCGGGGAGA TTATTTCCGT TTATCGGGAG TACAAGGAAG TGCTCACCGG TATTGAGGAA
AATCAGGACG TCCTGTCCGA CGGGGATCAG GAGTTGCGCG AGCTCGCCAA AGAGGAGCTG
AGCGCTTTGG AAACCCGTCA GGAGGAACTC CACGCCCGGT TGCAAAAGCT CTTGCTGCCA
AAGGACCCCA TGGATGACAA GAATATCATT CTGGAAATCC GGGCTGGAAC CGGCGGTGAA
GAGGCGGCGC TGTTTGTTGC TGATCTGCTC CGCATGTATA CTCGGTACGC GGAAACCATG
CACTGGAAAG TTGAACTCAT GAATTCCCAT CCGACTGGAT CCGGGGGGAT GAAGGAAGTC
ATCGCATCGA TTTCTGGGGC CTCGGTGTAC AGTCGATTGA AATATGAGTC CGGTGTTCAC
CGTGTCCAGC GTGTCCCGAG TACCGAGTCT CAGGGGCGGA TCCATACCTC GGCGGTAACA
GTGGCCATTT TGCCGGAAGC TGAGGAAGTC GATGTGGAGA TCGATCCTTC AGAATTGCGA
ATTGATTACT TTCGAGCCTC AGGCCCCGGC GGGCAAAGTG TGAACACCAC TGATTCTGCG
GTGCGCATCA CCCATATCCC TTCTGGTGTG GTCGTCTCCT GCCAGGATGA GAAATCCCAG
CACAAGAATA AGGCCAAGGC CATGAAGGTC CTTCGGTCAC GGATTCTGAA GGCCAAACAG
GAAGAGGCCA AAAAGGAACT CGACGCTAGC AGGCGATCCC AGGTCGGCAG TGGTGATCGG
TCTGAACGCA TCCGGACCTA CAATTTTCCC CAAGGGCGGA TTACAGACCA TCGCATCAAT
TTGACCCTCT ACAGCCTGGA AAATGTGCTG GCCGGCAATA TGGACGAGGT CATCGAACCC
TTGGTCCAGC ATGACCAGGC TGAAGCCCTT CGCGCGCAGG CCGAAGAATA A
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| Protein sequence | MFAKLDSIEE RYAEIEQELS SSDVLQDQQR YAELAKAHAD LGEIISVYRE YKEVLTGIEE
NQDVLSDGDQ ELRELAKEEL SALETRQEEL HARLQKLLLP KDPMDDKNII LEIRAGTGGE
EAALFVADLL RMYTRYAETM HWKVELMNSH PTGSGGMKEV IASISGASVY SRLKYESGVH
RVQRVPSTES QGRIHTSAVT VAILPEAEEV DVEIDPSELR IDYFRASGPG GQSVNTTDSA
VRITHIPSGV VVSCQDEKSQ HKNKAKAMKV LRSRILKAKQ EEAKKELDAS RRSQVGSGDR
SERIRTYNFP QGRITDHRIN LTLYSLENVL AGNMDEVIEP LVQHDQAEAL RAQAEE
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