Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2082 |
Symbol | |
ID | 8419932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2372396 |
End bp | 2373298 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038675 |
Product | protein-(glutamine-N5) methyltransferase, release factor-specific |
Protein accession | YP_003198944 |
Protein GI | 258406202 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000794612 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACGACT CCATCTTTTC CGAAATATTA TGCCAGCCGG GCCCCCTTAG CGCCGTCCTT CGGGCCGCGA CAGGGATATT GCGCCAAGCA GGGATCGACT CGGCCCGTCT TGACGCTGAA ATTCTCGTCG CTGATGCCCT GAGCGTGTCC CGGCTTGAGT TGTATCTGCA ACACGACCGC TGGATCCAGG CAGAGGAACT GCGACGCATT GCCATTCGGC TTGAGCGCCG GTCCAAGTTT GAGCCCGTGG CCTATATCGT GGGGTGTAAA GAATTTTACG GTCTGGATTT TCATGTTCGT CCCGGGGTAC TCATCCCTCG CCCGGAAACG GAGACGATCA TCGATGCCGT CCGAGAGTGG TTCACTCCTG AATCGATTTT CAGATTCGCC GACACCTGTA CTGGCAGCGG GATCCTCGGG GTGGTTCTAG CCACGTATTT TCCCCGAAGC CAAGGGGTGC TCATCGATAT AAGCGATGAG GCCCTCGCCA TAGCCCGCTC GAATGTTCAG TTGCACGGCC TGAAGCAGCG TCTTCTCGCA GTGCAGGGAG ACCTGCTCCA TCCAACCGCC CGGAACCAGC TGGACCTCGT GGTGGCCAAC CCGCCCTATC TGGCCCCCCG GGAAGTGGAG GAAACCATGC CGGACGTCCG CTTGCACGAG CCCCGCCTCG CGCTTGAAGG GGGAGATACA GGCTGCCTTT TCCTCCAACG ACTTGTGGAG CAGGCCCAAA GGGCGCTCAA GCCGGGCGGG ATGGTCTGTG TCGAAATGGG GTGGCAGCAG GAGCAGTGGG TTCAGGGGCA ATTCCATGGT CCGGCATGGG AACGAACGGC AGTACTCAAG GATCTCGCGG GACACGACCG GGTCGTTGTT GCCCACCGCT CAAAGTGTCA AAGAACAACA TAG
|
Protein sequence | MNDSIFSEIL CQPGPLSAVL RAATGILRQA GIDSARLDAE ILVADALSVS RLELYLQHDR WIQAEELRRI AIRLERRSKF EPVAYIVGCK EFYGLDFHVR PGVLIPRPET ETIIDAVREW FTPESIFRFA DTCTGSGILG VVLATYFPRS QGVLIDISDE ALAIARSNVQ LHGLKQRLLA VQGDLLHPTA RNQLDLVVAN PPYLAPREVE ETMPDVRLHE PRLALEGGDT GCLFLQRLVE QAQRALKPGG MVCVEMGWQQ EQWVQGQFHG PAWERTAVLK DLAGHDRVVV AHRSKCQRTT
|
| |