Gene Dret_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2082 
Symbol 
ID8419932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2372396 
End bp2373298 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID645038675 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_003198944 
Protein GI258406202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000794612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGACT CCATCTTTTC CGAAATATTA TGCCAGCCGG GCCCCCTTAG CGCCGTCCTT 
CGGGCCGCGA CAGGGATATT GCGCCAAGCA GGGATCGACT CGGCCCGTCT TGACGCTGAA
ATTCTCGTCG CTGATGCCCT GAGCGTGTCC CGGCTTGAGT TGTATCTGCA ACACGACCGC
TGGATCCAGG CAGAGGAACT GCGACGCATT GCCATTCGGC TTGAGCGCCG GTCCAAGTTT
GAGCCCGTGG CCTATATCGT GGGGTGTAAA GAATTTTACG GTCTGGATTT TCATGTTCGT
CCCGGGGTAC TCATCCCTCG CCCGGAAACG GAGACGATCA TCGATGCCGT CCGAGAGTGG
TTCACTCCTG AATCGATTTT CAGATTCGCC GACACCTGTA CTGGCAGCGG GATCCTCGGG
GTGGTTCTAG CCACGTATTT TCCCCGAAGC CAAGGGGTGC TCATCGATAT AAGCGATGAG
GCCCTCGCCA TAGCCCGCTC GAATGTTCAG TTGCACGGCC TGAAGCAGCG TCTTCTCGCA
GTGCAGGGAG ACCTGCTCCA TCCAACCGCC CGGAACCAGC TGGACCTCGT GGTGGCCAAC
CCGCCCTATC TGGCCCCCCG GGAAGTGGAG GAAACCATGC CGGACGTCCG CTTGCACGAG
CCCCGCCTCG CGCTTGAAGG GGGAGATACA GGCTGCCTTT TCCTCCAACG ACTTGTGGAG
CAGGCCCAAA GGGCGCTCAA GCCGGGCGGG ATGGTCTGTG TCGAAATGGG GTGGCAGCAG
GAGCAGTGGG TTCAGGGGCA ATTCCATGGT CCGGCATGGG AACGAACGGC AGTACTCAAG
GATCTCGCGG GACACGACCG GGTCGTTGTT GCCCACCGCT CAAAGTGTCA AAGAACAACA
TAG
 
Protein sequence
MNDSIFSEIL CQPGPLSAVL RAATGILRQA GIDSARLDAE ILVADALSVS RLELYLQHDR 
WIQAEELRRI AIRLERRSKF EPVAYIVGCK EFYGLDFHVR PGVLIPRPET ETIIDAVREW
FTPESIFRFA DTCTGSGILG VVLATYFPRS QGVLIDISDE ALAIARSNVQ LHGLKQRLLA
VQGDLLHPTA RNQLDLVVAN PPYLAPREVE ETMPDVRLHE PRLALEGGDT GCLFLQRLVE
QAQRALKPGG MVCVEMGWQQ EQWVQGQFHG PAWERTAVLK DLAGHDRVVV AHRSKCQRTT