Gene Dret_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2078 
Symbol 
ID8419923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2368848 
End bp2369096 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content48% 
IMG OID645038666 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_003198940 
Protein GI258406198 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA AAAAAAAGAA AAATCTTGAG CAAGCCAAGA AACAGGACCA AGGGCTGCAA 
GGCAAAATTG CGCAGTTCAA GGAGTTCTTT GAAGAGTCCC AGGTCGAGCT GAAAAAGGTC
ACCTGGCCGA CTCGCAAAGA AACCTTGCAA ATGAGCGGAA CTGTTTTGCT CTTTGTTGCT
GTCCTCGCCC TTTTCCTTGG GTTGGTTGAC GTCACCCTGG CCAAAATCAT TGAAGCCGTA
CTTTCGTGA
 
Protein sequence
MAKKKKKNLE QAKKQDQGLQ GKIAQFKEFF EESQVELKKV TWPTRKETLQ MSGTVLLFVA 
VLALFLGLVD VTLAKIIEAV LS