Gene Dret_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2076 
Symbol 
ID8419921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2367802 
End bp2368227 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID645038664 
Productribosomal protein L11 
Protein accessionYP_003198938 
Protein GI258406196 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA AAGTACTGGC AAAAATCAAA CTGCAGATTC CTGCTGGATC CGCGAATCCA 
TCTCCGCCTG TCGGCCCCGC CCTGGGGCAG CACGGCGTCA ATATAATGGA ATTCTGTAAG
GCCTTCAACG CCAAGACCCA GGAACAAAAG GGTATGGTGA CCCCTGTGGA GATTACGGTC
TATCAGGACC GGACCTTCAC CTTCATCACC AAGACCCCTC CTGCCTCTGT CCTGCTGCTC
AAGGCCGCCA AGCTGGATAA AGGTTCCGGT GAGCCCAACA AGCAAAAGGC GGGCAAGGTG
ACCATGGAGC AGGTGAGGGA GATCGCTCAG ACCAAGATGC CCGACCTGAC GGCCAGCGAT
CTGGACGCGG CTACGCGTTC CGTGACAGGT ACCGCGAAGA GCATGGGTAT CGAGGTTGAA
AATTAG
 
Protein sequence
MAKKVLAKIK LQIPAGSANP SPPVGPALGQ HGVNIMEFCK AFNAKTQEQK GMVTPVEITV 
YQDRTFTFIT KTPPASVLLL KAAKLDKGSG EPNKQKAGKV TMEQVREIAQ TKMPDLTASD
LDAATRSVTG TAKSMGIEVE N