| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2075 |
|---|
| Symbol | |
|---|
| ID | 8419920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2367080 |
|---|
| End bp | 2367784 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645038663 |
|---|
| Product | ribosomal protein L1 |
|---|
| Protein accession | YP_003198937 |
|---|
| Protein GI | 258406195 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGC ACGGTAAAGC ATATAAAAAA GCAACTGAAA ATCTGGATAC GCAGAGCCGC
TATTCTTTGG AAGAAGGGGT CGCCAATGCG CTGCAGGCTG CGTATGCCAA ATTTGACGAA
ACCGTCGATG CAGCTGTGTG CCTTGGTGTC AATCCCCGCC ATCCGGATCA GATGGTCCGC
GGTGCGGTGA GCCTGCCCCA CGGCATCGGC AAAGACGTTC GGGTCATTGC TTTTTGTAAA
GGTGAGAAAG AGGAAGAGGC CAAAAATGCT GGAGCGGATG CAGCCGGGGC TGAAGAGCTC
GTGCAGAAGA TCCAGGACGG GTGGCTCGAA TTTGACAAAG CCGTCGCCAC ACCGGACATG
ATGGCCCATG TGGGGAAAAT CGGGCGCGTC CTGGGGCCCC GTGGATTGAT GCCCAACGCC
AAGACCGGCA CAGTGACCTT TGATATCGCG ACCGCTATCA AAGAGCTCAA GGCCGGCAAA
GTCGAATTCC GTGTCGATAA AAACGGGGTG ATCCACGCTC CGCTGGGCAA GGTCTCCTTT
GGCCCGGAAA AGATCCAAGA CAATCTTGTG AGTCTGTTGC AGACCCTGGT GCGCTTGAAA
CCCAGCGCCG CCAAGGGGAC CTATCTGCGC AAACTCGCAG TTTCAACGAC GATGGGGCCG
GGGGTGAAAA TCGAAACCGC CTCGGTCCGT CGCATGGTCG AGTAA
|
|---|
| Protein sequence | MPKHGKAYKK ATENLDTQSR YSLEEGVANA LQAAYAKFDE TVDAAVCLGV NPRHPDQMVR
GAVSLPHGIG KDVRVIAFCK GEKEEEAKNA GADAAGAEEL VQKIQDGWLE FDKAVATPDM
MAHVGKIGRV LGPRGLMPNA KTGTVTFDIA TAIKELKAGK VEFRVDKNGV IHAPLGKVSF
GPEKIQDNLV SLLQTLVRLK PSAAKGTYLR KLAVSTTMGP GVKIETASVR RMVE
|
|---|
| |