| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2062 |
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| Symbol | rplB |
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| ID | 8419907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2350499 |
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| End bp | 2351326 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645038650 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_003198924 |
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| Protein GI | 258406182 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000331539 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.228916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTATCC GGAAGCTTAA ACCGACTTCC CCCGGGCGTC GATTCCAGAC CGTTTCTATG
TATGTGGATG TTACCCGGGA GACGCCTGAA AAGAGCCTGA CGAAGGGCTT GGGACGCAAA
AGCGGGCGTA ATAATGCCGG ACGGGTAACG TCCCGTCGTC AAGGTGGCGG AAACAAGAGA
CGATTTCGCG TTATTGATTT CAAGCGCAAC AAGGCCGAAA TACCGGCCAA AGTCGCCACC
ATTGAATATG ATCCCAACCG CAGTGCCCGG ATCGCGCTTC TGCACTATGT CGATGGGGAA
AAGCGCTATA TTCTGGCTCC CTTGGGCCTG AAAGTGGGCG ATTTTGTCTA CTCCGGTGAC
AATGTGGACA TCAAGCCCGG CAACGCCATG CAGCTGAAGT CCATACCGGT CGGGACCACC
GTGCACAATA TTGAATTGGT TCCAGGCAAA GGCGGGCAAA TGTGCCGCTC AGCCGGAACA
TACGCGCAGC TGGTCGCTAA AGAAGGCAAG TATGCTTTGC TCCGGCTTCC CTCCGGGGAG
ATCCGGCATG TCCTGGCTGC ATGCCAAGCT ACGGTCGGTC AGGTGGGCAA TGTGCACCAT
GAAAATATTC GAGTGGGTAA AGCTGGCCGG AATCGCTGGA AGAATCGTCG TCCTAAGGTG
CGTGGCGTGG CCATGAACCC GATCGACCAC CCCCTTGGTG GTGGTGAGGG CCGCAGTTCT
GGCGGTCGTC ATCCGGTGAC CCCTTGGGGA CGGCCAACGA AAGGGTATAA GACACGAAAT
CCCAAGAAAC CTTCTTCGCG TTTGATTGTT AAGAGAAGGA ATAAATAG
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| Protein sequence | MSIRKLKPTS PGRRFQTVSM YVDVTRETPE KSLTKGLGRK SGRNNAGRVT SRRQGGGNKR
RFRVIDFKRN KAEIPAKVAT IEYDPNRSAR IALLHYVDGE KRYILAPLGL KVGDFVYSGD
NVDIKPGNAM QLKSIPVGTT VHNIELVPGK GGQMCRSAGT YAQLVAKEGK YALLRLPSGE
IRHVLAACQA TVGQVGNVHH ENIRVGKAGR NRWKNRRPKV RGVAMNPIDH PLGGGEGRSS
GGRHPVTPWG RPTKGYKTRN PKKPSSRLIV KRRNK
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