| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2051 |
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| Symbol | rpsH |
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| ID | 8419896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2346484 |
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| End bp | 2346867 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645038639 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_003198913 |
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| Protein GI | 258406171 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00264712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0310663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTTG TCGATCCCAT TGCCGATATG CTGACGCGTA TCCGCAATGC CCACTTAGCC
TTGCAGAAGG AAGTGGTCGT TCCCAGATCA AAAGCCAAGA AGGCGATTGC GGAGATCCTT
CAAGAGCAGG GGTACGTCCT TTCCGTCACC GAAGGTGAGC GCGAGTTGAC TTTGACTTTG
AAATACGTCG GGCGGAAGCC GGCGATCAGC GGTCTCAAGC GCAAGAGCCG TTGCGGGTTG
CGCCAGTATG TCGGAGTCGA TGAGATTCCG CAGGTGCAAA ATGGCCTTGG TATCTGTGTA
CTTTCAACAT CGAAAGGAAT TGTCGATGGG GAAAAGGCGA AGCAGATGCA TGTGGGCGGT
GAATTAATGT GTGAAATCTG GTAA
|
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| Protein sequence | MAVVDPIADM LTRIRNAHLA LQKEVVVPRS KAKKAIAEIL QEQGYVLSVT EGERELTLTL
KYVGRKPAIS GLKRKSRCGL RQYVGVDEIP QVQNGLGICV LSTSKGIVDG EKAKQMHVGG
ELMCEIW
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