| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2050 |
|---|
| Symbol | |
|---|
| ID | 8419895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2345934 |
|---|
| End bp | 2346470 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645038638 |
|---|
| Product | ribosomal protein L6 |
|---|
| Protein accession | YP_003198912 |
|---|
| Protein GI | 258406170 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00433386 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0184636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAA TTGGCAAGCT TCCAGTACAA ATCCCGCAGG GTGTCGAAGT CACGCTGAAT
AAAGACAGTG TTGATCTTAA AGGGCCCAAG GGGGAACTGC AGGTACCTGC GCATACCAAA
ATTCGGTTTG CTCAAGAAGG TGATGCTATC CTCGTCAATC GTGTTGATGA TAGCCGGCCG
GCAAAGGAGC AGCACGGACT GCGCCGGACT CTGTTACAGA ATGCGGTGGA CGGTGTCACG
AAAGGCTTTG AGAAAGGCCT TGAACTCGTT GGCGTTGGGT ATCGTGTTGC TGTCAAAGGG
CAAACTGTTG AATTGAACGT CGGATATTCC AACCCGGTTG AATTTTCGCT TCCTGATGGG
ATCAGTGCTC GCGTCGAAGG AAATAAGATT TTCATCGCCG GAATTGATAA ACAATTGGTC
GGCGAGATTG CGGCACAGAT CCGTCGTGTT CGTCCCCCAG AGCCGTATAA AGGCAAGGGC
ATCAAGTTTA TCGATGAGCA GATTCGCCGC AAGGCTGGTA AATCCGCCAA AAAATAG
|
|---|
| Protein sequence | MSRIGKLPVQ IPQGVEVTLN KDSVDLKGPK GELQVPAHTK IRFAQEGDAI LVNRVDDSRP
AKEQHGLRRT LLQNAVDGVT KGFEKGLELV GVGYRVAVKG QTVELNVGYS NPVEFSLPDG
ISARVEGNKI FIAGIDKQLV GEIAAQIRRV RPPEPYKGKG IKFIDEQIRR KAGKSAKK
|
|---|
| |