Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2045 |
Symbol | |
ID | 8419890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2343132 |
End bp | 2344439 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645038633 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_003198907 |
Protein GI | 258406165 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000027617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00154147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGCCAA AAGCGGACAA CCTCCCAGGC TCCAGTGAAC TGAGTAAGCG GATCATAACC ACCTTTTTGT TGCTCGTTGT CTATCGGTTG GGGATTCACA TTCCCATACC GATGGTTGAC GGCCAGGCAC TGGCTGAATT TTTTGCCAAC GCCCAAAATA CCCTTTTCGG GTTGTTTGAC ATGTTTTCCG GCGGCGGACT GAGTAAACTC TCCATTTTCG CCCTCGGAAT CATGCCCTAT ATTTCGGCGT CGATTATCAT TCAGCTCTTG ACGGTCGTTA GCCCCAAGCT TGAGGAATTG AAAAAGGAAG GGGCCTCGGG GCAAAAGAAG ATCACAGAGT ACACCAGATA TCTGACAGTG CTTATAACCC TGGTCCAAGG GTTCGGGATC TCTTTTGGCC TGGAGCGGAT GACCAGTCCC ACTGGGGCTC CAGTTATTCC TGATCCGGGC TGGATGTTCC GGCTGACCAC TGTGATCACC CTCACAACCG GGACCGTTTT TCTCATGTGG CTTGGCGAGC AGATCACTGA CCGGGGAATC GGCAACGGCA TTTCCCTGAT CATCTTTGGT GGCATTGTCG CCCGGCTCCC CGGGGCTGCT GGCAATACCT TCCGGCTCAT GTCCGCCGGG GAGATGTCGC TCTTTCTGGT CTTGCTGCTT TTGACCGTAA TGCTCGGCGT GTTGGGTTTT ATCGTTTTCA TGGAGCGCGG GCAGCGTCGG TTGCCCATCC ATTATGCCAA GCGACAGATG GGCAGGAAGA TGTATGGGGG GCAAACGAGT CATTTACCAC TTCGGGTGAA TACCGCCGGG GTCATCCCGC CAATTTTTGC CTCCTCGATT CTGATGTTCC CGGCGACGGT GGCGAATTTT TCGCAAGTGC AGTGGATGCA GGAGTTCTCA AATTATTTTC GTCCAGGCTC AACCATCTAC ACACTGGTTT TCGTCGCCTT GATCCTGTTT TTCTGCTACT TCTATACCGC GATCATTTTC GATCCCAAGG ATATAGCTGA CAATCTGCGC AAGCAGGGAG GCTTTATTCC CGGGATCCGT CCGGGCCTGA AAACAAAACA GTATATCGAC AAGGTCCTGT CGCGGATCAC ATTGTGGGGC GCCTTGTATG TGGCAGCGAT ATGTGTACTG CCCATGCTCC TGATCTCTCA ATTTAATGTC CCCTTTTACT TTGGCGGCAC AGCGTTGCTC ATTGTCGTTG GGGTGGCCAT GGACACGATG GGCCAGATCC AGTCCCATGT GATCTCGAAT CAGTATCAGG GACTGATGCA AAAAGCCGGT CTCCGAGGAA GGCGCTAG
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Protein sequence | MLPKADNLPG SSELSKRIIT TFLLLVVYRL GIHIPIPMVD GQALAEFFAN AQNTLFGLFD MFSGGGLSKL SIFALGIMPY ISASIIIQLL TVVSPKLEEL KKEGASGQKK ITEYTRYLTV LITLVQGFGI SFGLERMTSP TGAPVIPDPG WMFRLTTVIT LTTGTVFLMW LGEQITDRGI GNGISLIIFG GIVARLPGAA GNTFRLMSAG EMSLFLVLLL LTVMLGVLGF IVFMERGQRR LPIHYAKRQM GRKMYGGQTS HLPLRVNTAG VIPPIFASSI LMFPATVANF SQVQWMQEFS NYFRPGSTIY TLVFVALILF FCYFYTAIIF DPKDIADNLR KQGGFIPGIR PGLKTKQYID KVLSRITLWG ALYVAAICVL PMLLISQFNV PFYFGGTALL IVVGVAMDTM GQIQSHVISN QYQGLMQKAG LRGRR
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