Gene Dret_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2041 
Symbol 
ID8419886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2341415 
End bp2341810 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content53% 
IMG OID645038629 
Product30S ribosomal protein S11 
Protein accessionYP_003198903 
Protein GI258406161 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00199904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00122216 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGC AAAAACGGCG TACCGTCAGC AGGAAAAAAG TTAAAAAGAA CGTTCCTGTT 
GGACTAGCGC ACATTCAAGC GACCTTCAAC AATACAATCA TTACCTTTAC CGATATGGAC
GGCAATGTGA TCAGCTGGGC GACTTCCGGT ATGTCCGGGT TTAAAGGGTC CAAGAAAAGC
ACGCCCTATG CCGCTCAGAT TGCCGCTGCC AATGCGGCGA AAAAGGCGCA AGAGCACGGT
ATGCGTTCCG TTGGCATCTT GGTAAAGGGT CCGGGGTCCG GACGGGAATC CGCCATGCGG
GCGATCAATT CCGCCGGTTT TAAAGTGACC TTTATTCGTG ATATTACCCC GATCCCGCAT
AACGGTTGCC GTCCTCCCAA ACGGCGCCGA GTCTAA
 
Protein sequence
MAKQKRRTVS RKKVKKNVPV GLAHIQATFN NTIITFTDMD GNVISWATSG MSGFKGSKKS 
TPYAAQIAAA NAAKKAQEHG MRSVGILVKG PGSGRESAMR AINSAGFKVT FIRDITPIPH
NGCRPPKRRR V