| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2028 |
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| Symbol | |
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| ID | 8419873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2326508 |
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| End bp | 2327236 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038616 |
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| Product | ABC transporter related |
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| Protein accession | YP_003198890 |
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| Protein GI | 258406148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00425116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0013644 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCCAAT TCAACCACGT CTCCAAGTGG TTTGGCGATT TCCAGGTCTT AAAGGACATC
AACCTCCACA TCGAGCGCGG CGAGGTCGTG GTCATCTGCG GCCCCAGCGG ATCAGGCAAA
AGCACCCTTA TCCGCTGCAT CAACAAATTG GAACCGTATC AGCAGGGGCA GATCCGGGTC
GATGGGGTCG ACCTGGCGGA TCCGGAACTC AGCTTGAGCC AGTTGCGAGC TGAAATCGGT
TTCGTCTTCC AGCAATTTAA TCTCTACCCG CACATGTCGG TTCTGGAAAA TGTGACCCTT
GCCCCGCTTT TGGTCCGGCG CATGTCTCCT TCGGCCGCGG AAGACCGTTC CATGCAGCTG
CTGAACAAAG TCGGCATTCC CGAAAAGGCC CATTCCTATC CGGCCCAATT ATCCGGCGGG
CAACAGCAAC GGGTAGCTAT CGCCCGCGGT TTGGCCATGC AGCCGAAGAT CATGCTCTTT
GACGAACCGA CGTCAGCCCT GGATCCGGAA ATGATCAACG AAGTCCTTGA GGTCATGAAG
ACCTTGGCCC GGGAAGGCAT GACCATGATC GTGGTCACCC ACGAAATGGG CTTTGCCCGG
GAAGTGGCCG ACAGGGTCAT CTTCATGGAC GAGGGTGAAA TGATCGAAAC CAACACCCCG
GAAGACTTTT TCCACCACCC GCAAAACGAG CGGACCCAAC TTTTCCTGAG CAAAATCCTG
GCCCATTAA
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| Protein sequence | MIQFNHVSKW FGDFQVLKDI NLHIERGEVV VICGPSGSGK STLIRCINKL EPYQQGQIRV
DGVDLADPEL SLSQLRAEIG FVFQQFNLYP HMSVLENVTL APLLVRRMSP SAAEDRSMQL
LNKVGIPEKA HSYPAQLSGG QQQRVAIARG LAMQPKIMLF DEPTSALDPE MINEVLEVMK
TLAREGMTMI VVTHEMGFAR EVADRVIFMD EGEMIETNTP EDFFHHPQNE RTQLFLSKIL
AH
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