| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2024 |
|---|
| Symbol | |
|---|
| ID | 8419869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2322478 |
|---|
| End bp | 2322711 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645038612 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003198886 |
|---|
| Protein GI | 258406144 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1837] Predicted RNA-binding protein (contains KH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000350692 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0107931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGG ATCTAGTGGA GTATGTCGCC AAATCATTGG TTGATGTTCC TGAGGCGGTG
GAAGTCAAGG AAATTGAGGG CGAGCAAACG ACCGTCATCG AACTGAAGGT AGCCAAGGAA
GATCTGGGCA AGGTTATCGG TCGCCAGGGG CGCACCGCGC GGGCCCTGCG GACCATCTTG
GGGGCGGCCT CGACCAAGGC GCAGAAACGG GCTGTTCTGG AAATCCTGGA ATAA
|
|---|
| Protein sequence | MLKDLVEYVA KSLVDVPEAV EVKEIEGEQT TVIELKVAKE DLGKVIGRQG RTARALRTIL
GAASTKAQKR AVLEILE
|
|---|
| |