Gene Dret_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2021 
Symbol 
ID8419866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2320156 
End bp2320512 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content57% 
IMG OID645038609 
Productribosomal protein L19 
Protein accessionYP_003198883 
Protein GI258406141 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.143902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCT TGCGGAAAAT CGAACGGGAC CATTTGCGGA TCGATATCCC TCAATTCCGC 
GCCGGCGATA CTGTGAATGT CCACGTGCGG ATCATTGAAG GCGAGAAAGA GCGCATTCAG
GTCTTCAAGG GCACAGTGAT CAAGGTGCGT CGCGGCGGAA CCGACGCCAC GTTCACGGTA
CGGAAAATTT CCGGCGGAAT CGGTGTGGAG CGGGTCTTCC CCTTGCATTC TCCCGCCATT
GAGCGTGTTG AGGTGGTCAC GGAAGGAAAG GTGCGCCAGA GCCGCATTTA CTATCTCCGC
CAGCTCAAGG GCAAAGCGGC CCGCATCAAA CCCCGGAACA CCATGGGCAG AAAATAG
 
Protein sequence
MDALRKIERD HLRIDIPQFR AGDTVNVHVR IIEGEKERIQ VFKGTVIKVR RGGTDATFTV 
RKISGGIGVE RVFPLHSPAI ERVEVVTEGK VRQSRIYYLR QLKGKAARIK PRNTMGRK