| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2013 |
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| Symbol | |
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| ID | 8419858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2313354 |
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| End bp | 2314748 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038601 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_003198875 |
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| Protein GI | 258406133 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCC CGCACCCCAC GCCCCTCAGC CGCGCCCATA AGCGGTTTTT GCGCTCGCTG
TTTCCCGCCG AGGGGTTGCT CCTGGCTCCG GAAGCTATGC ATGTCTATGG CATTGACGCC
AGCCGGTCCC ACGCCATGCC CCAGGCCGTG GTCCGCCCCA GTTCCGTGGA GCAGGTCCAG
CGTCTTCTGG CCTGGGCCGA TGCCGAAACG ATCCCTGTTT ATACCCGAGG GCGGGCGACC
AATGTCGTCG GCGGCTGTGT GCCTGAGCGG GGCGGGGTTG TTCTGTCCAC CCTGCATTTG
AACCGTATTC TGGAGATTGA TGCCCATGAC TTTGTGGCTG TGGTCCAGCC TGGGGTGATT
ACGGGGGAGC TCCAAAAAGA GGCCCGGGCC AAGGGATTAT TGTATGCGCC GGACCCGGCC
AGTGCGGCGG TCAGTTCCAT CGGGGGCAAC GTGGCCACCA ATGCCGGGGG AATGCGAGCC
GTGAAGTACG GCGTGACCCG GGACGCCGTG CTCGGTCTGG AGGCGGTGCT GCCGGGCGGC
AGAATCATCC GGACCGGAGC GCGGACCCAT AAGGACGTCG CCGGACTTGA TTTGACCTCT
CTTCTCGTCG GATCCGAGGG GACTTTGGGT GTTGTGACCC GGGCCTGGCT CAAACTCCTG
CCGGCACCAC CGCAGACCGC TTCTGTGCTC GCCTTTTTCC CTGAGCTTGA GACCGCCCTG
GAGGCGGCGC AAGCCGTTTT CATGGCCGGG ATGCTCCCGG TGGCCCTGGA ATTTCTGGAC
CGCGACGTGC TGGGATGCAT TCGGCAGATA GCCCCGCTTC CCAAGGCCGA GACCGCTGCT
GCGGCCCTGC TGATCCAGGT CGATGGGATC AGCGCCTGTG TGGCCGCTCA GAAAGAGGCG
GTGGAGACCG TCTGTACCCA GGCCGGAGCC ACAACCCTTT ATACCGGCCT TGGCTCTCAG
GAGGAGCAGC GGGTCTGGCA GGCCCGGCGG CTGATCAATC AGGCCTCTTT CCGGATTGCT
CCGCATAAAT TCAGCCAGGA TGTGACGGTG CCCCGGGGCC GCGTGGGGCG GTATATCCAG
GGCGTGAAAC AGATCGCCGC TGAGGAAGGG GTGACCATTT TGACCTTTGG CCATCTCGGT
GACGGGAACA TCCACACGAA TATCATGTAC GACAAAGGCC GACAGTCCCA GCGCCAGGCC
GTTGGACGGG CCTCCCGGCG CATTTTGCGC TTCGTGCTGG AACTCGAGGG GTCCTTGTCC
GGCGAACACG GTATCGGCCG GAGCCGACGG ACGTTTGTCC ACGAACAGAT CGGACGGGAA
CAGCAATCCC TGATGCGCCG GGTGAAACAT GTTTTTGATC CAAACGCCAT TCTCAATCCG
GACAAGGGAT ATTGA
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| Protein sequence | MSLPHPTPLS RAHKRFLRSL FPAEGLLLAP EAMHVYGIDA SRSHAMPQAV VRPSSVEQVQ
RLLAWADAET IPVYTRGRAT NVVGGCVPER GGVVLSTLHL NRILEIDAHD FVAVVQPGVI
TGELQKEARA KGLLYAPDPA SAAVSSIGGN VATNAGGMRA VKYGVTRDAV LGLEAVLPGG
RIIRTGARTH KDVAGLDLTS LLVGSEGTLG VVTRAWLKLL PAPPQTASVL AFFPELETAL
EAAQAVFMAG MLPVALEFLD RDVLGCIRQI APLPKAETAA AALLIQVDGI SACVAAQKEA
VETVCTQAGA TTLYTGLGSQ EEQRVWQARR LINQASFRIA PHKFSQDVTV PRGRVGRYIQ
GVKQIAAEEG VTILTFGHLG DGNIHTNIMY DKGRQSQRQA VGRASRRILR FVLELEGSLS
GEHGIGRSRR TFVHEQIGRE QQSLMRRVKH VFDPNAILNP DKGY
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