| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2011 |
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| Symbol | |
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| ID | 8419856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2309679 |
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| End bp | 2312189 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038599 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_003198873 |
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| Protein GI | 258406131 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGTG GAATCGCCAA AAAAATGTTT GGCTCGAAAA ACGAGCGTTT CTTGAAGACG
GTCTGGCCCA TGGTGGAGAC CATCAATGGG TTGGAACCGC AGATGCAGGA GTTGGAAGAC
GCAGATTTTC CGGCCAAGAT CAATCAATGG CGCGAGGAGG TGGCCCAGGG GCGCTCAGTG
GATGAGTTGC TGCCCCAGGT CTTCGCTCTG GTTCGGGAAG CCGGGAAACG GGCCCTCGAA
ATGCGGCATT TCGACGTCCA GCTTATGGGC GGTATTATTC TGCACCAGGG CCGGATCGCG
GAAATGAAGA CCGGTGAGGG GAAAACGCTG GTCGCGACGT TGCCGTTGGT CCTCAACGCC
TTGAGTGGCA AAGGGGCCCA TCTGGTGACG GTCAACGACT ATCTGGCCCG CCGGGACGCG
GAATGGATGG GCCAGCTGTA CAATTTCCTC GGCCTGTCCG TGGGGAGCAT CATGCACGGC
ATGACCGATG AGGAACGCAA AGCCGCCTAT GCCGCGGATA TCACCTATGG GACCAACAAC
GAATTCGGTT TCGATTATCT GCGCGACCAC ATGAAATTCT ACGCCGATCA GTTGGTTCAA
GGCGAACTCC ATTTCGCCAT CGTGGACGAG GTCGACTCCA TTTTGATCGA CGAGGCCCGG
ACACCGCTGA TCATTTCCGG TCCGGCGGAA GATTCCACCG CCATGTACAA ACGGATCAAT
ACCATCGTGC CCCAACTCAA GCGCGACCGG GATTTCAACG TCGACGAAAA GGCCAAGACC
GTCACCTTCA CTGAGGACGG TGTGGCCCGC TGCGAACAGA TTCTGGGGCT GGAAAACCTT
TTCGACGCCC AGAACATCCA TTTCCAGCAC CATATCCTGC AGGCGCTCAA GGCCCACGAA
CTCTTCACCC GCGACGACGA CTATATCGTC AAAGACGGCC AGGTCATCAT CGTCGACGAA
TTTACCGGCC GGCTCATGCC GGGGCGCCGT TTCAGCGACG GCCTGCACCA GGCCCTGGAA
GCCAAGGAAG GGGTCAAGGT CGAGGCGGAA AACCAGACCC TGGCCCAGAT CACCTTCCAG
AATTTTTTCC GCATGTACGA CAAGCTTTCA GGCATGACCG GTACCGCGGA TACCGAAGCC
GTGGAATTCA ACCAGATCTA CAACCTGGAA GTCTCGGTCA TTCCGACCCA CAAGCCGATG
GTCCGTGAAG ATTTTTCGGA TGTGGTCTAC CGGACCCAGC AGGAAAAATA CGAGGCCATC
GCTCAGGAGA TCAGCGACCT GTACACCAAG GGCCAGCCTG TCCTGGTGGG CACCACCTCC
ATCGACAAAT CGGAACTCAT TTCGAACCTG CTCAAGAAGC GCAAGGTGCC CCACGAGGTT
TTGAACGCCA AGCACCACGA GAAAGAAGCT GAGATCGTGG CCGGCGCCGG TGAGCGGGGC
AAAGTGACCA TCGCCACGAA CATGGCCGGC CGCGGGACGG ACATCGTGCT CGGCGACGGG
GTTCGCGAAC TCGGCGGGTT GCACATCCTG GGCACGGAGC GCCACGAGAG CCGACGGATC
GACAACCAGC TCCGGGGACG GTCCGGTCGT CAGGGGGATC CTGGCAGCTC CCGGTTTTAT
CTGGCCCTGG ACGATGATCT GCTGCGGCTT TTCGGGTCTG ACCGGATTTC CGGGCTGATG
CAGAAGCTCG GCGTTGAAGA AGGGCAGGCC ATTGAAAACA AGATGATTTC CCGGGCCATC
GAGAATGCGC AGCGGCGGGT CGAGGCCCAT AACTTTGATA TCCGCAAGCA GCTGCTGGAA
TACGACGACG TCATGAACCA GCAGCGCGAG GTCATTTACA CCCAGCGCCG GGAGATCATG
GCCAGCGACG ACCTGGAGTC CATGATCGAC GAATTCGTCG ATGAAGTGGT GGACGTCATC
TACCAGCCGG TGCACATGGC CGACAAAGAG GGCCCGGACC AGGAGACACT GGATATGGTT
CAGGCCCAAT TGGAGGATGT GTTCGGGCTC AAGCGGTGGC TGGACACCTC CGCCGGCCTG
CCGGACCAGG AGACGACCCG GGAGACGGTG CGCAAGATTC TGGCGCATCT CAAAGAAGAG
GCCGGGGAGC ACTATCTGGA AATTCTGCGC TTCTTTCTGC TGGAGTCCCT GGACCGGATC
TGGAAAGAGC ATCTGCTGAC CATGGACCAC CTCAAGGAAG GCATTGGCCT GCGCGGTTAT
GGACAGAAGG ATCCGAAACA GGAATACAAG CGTGAAGGGT TTGAACTCTT TCAAGACATG
CTTTTCCGGA TCAAGGAAAG CACCTTGAAG GCCCTGAGCC ATCTGCGTCT GCAGCGGGTG
GCTGAAGAAG AACTCAAGCA CAAGGAACAG CCGCAGGACT TGAATTATTC CGGGGCCGAC
GAAAGCGGCG AAGCGCAAAA GACCTACAAG CGGGAGCAGC CCAAGGTCGG TCGCAACGAT
CCGTGCCCCT GTGGCAGCGG CAAGAAATAC AAACGGTGCT GCGGCCAATA A
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| Protein sequence | MFGGIAKKMF GSKNERFLKT VWPMVETING LEPQMQELED ADFPAKINQW REEVAQGRSV
DELLPQVFAL VREAGKRALE MRHFDVQLMG GIILHQGRIA EMKTGEGKTL VATLPLVLNA
LSGKGAHLVT VNDYLARRDA EWMGQLYNFL GLSVGSIMHG MTDEERKAAY AADITYGTNN
EFGFDYLRDH MKFYADQLVQ GELHFAIVDE VDSILIDEAR TPLIISGPAE DSTAMYKRIN
TIVPQLKRDR DFNVDEKAKT VTFTEDGVAR CEQILGLENL FDAQNIHFQH HILQALKAHE
LFTRDDDYIV KDGQVIIVDE FTGRLMPGRR FSDGLHQALE AKEGVKVEAE NQTLAQITFQ
NFFRMYDKLS GMTGTADTEA VEFNQIYNLE VSVIPTHKPM VREDFSDVVY RTQQEKYEAI
AQEISDLYTK GQPVLVGTTS IDKSELISNL LKKRKVPHEV LNAKHHEKEA EIVAGAGERG
KVTIATNMAG RGTDIVLGDG VRELGGLHIL GTERHESRRI DNQLRGRSGR QGDPGSSRFY
LALDDDLLRL FGSDRISGLM QKLGVEEGQA IENKMISRAI ENAQRRVEAH NFDIRKQLLE
YDDVMNQQRE VIYTQRREIM ASDDLESMID EFVDEVVDVI YQPVHMADKE GPDQETLDMV
QAQLEDVFGL KRWLDTSAGL PDQETTRETV RKILAHLKEE AGEHYLEILR FFLLESLDRI
WKEHLLTMDH LKEGIGLRGY GQKDPKQEYK REGFELFQDM LFRIKESTLK ALSHLRLQRV
AEEELKHKEQ PQDLNYSGAD ESGEAQKTYK REQPKVGRND PCPCGSGKKY KRCCGQ
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