Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2002 |
Symbol | |
ID | 8419847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2299335 |
End bp | 2300561 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645038590 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_003198864 |
Protein GI | 258406122 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTGT CCCAGTTAAC CAAATTGACG CTGGATATTC AAGGATTTCG TGTCGGTCGG GTTCAAGGTG ATACGAGCGG GATCACCGTA GATATAGCCC CAGACCGGCG TCATCTGCTC TTTTGCAGCC GCTGCGGCAG CGCTGCCAAG TATCGGGATA CCCTTACAAG TCGCTATTTT CGCCATGTCC CTCTTTGGGG GATCCCTGTA TGGCTCCGGT ACAGCCCCCG CAGAGTTCGG TGCGGACATT GTGGCGTCAA GGTGGAGTAT TTCCCCTGGA GCACAGGCAA ACATCGGTTC ACAACGGCTT TTGCCCACTT CCTGGCTTCG TGGGCCCGGT TACTGCCCTG GAAACATGTA GCACAGCTTT TTGGTTGCTC CTGGGGTACC GTGGCCGCTG CTGTTGACCA GATTGTCGAG TATGGTCTGG CCCATCAAGA TCTCTCGAAT CTGACGCACA TTGGGATTGA CGAAATCTCC CGAGAAAAGG GCCAAGTATA CCTAACCAAT GTCTACGACC TGAATACCTC CAGACTCGTA TGGAGCGGGG AAAAACGGAC AAAGGCAACA ATTACCAACT TCTTCACCTC GCTTGGCCCT AGCAAGATCG ATAAGCTTGA AGGGGTCTGT TGCGACATGT GGGAGCCGTA TACCCAGGTC ATTCAAGACA AGGCCCCGAA AGCGACGATG GTCTTCGACA AATTCCACAT TGTCCGGCAT CTCAATGAAG CCGTTGACCA GGTCCGTAGA GACGAGATCC GGGAGAAGGG CCAAAAGCAC AAGGATCTGG TTAAAGACAC CCGATATATC TGGCTCAAGA ACCCGTGGAA CCTGACTGAC AAGCAGGCAT CTCGGTTGAG TGCACTGGAA AAACTCAATC TCAAAATCAA CAGGGCGTAT TTACTCAAGG AATCATTTCG CCAGTTCTGG TCGTATGAGT GCAGGACTTC AGCCAAAGAT TTCCTCGACA AGTGGTTCTG GTGGGCGACG CATTCCAGGC TGAAGCCAAT GCGAAATTTT GCTTGGATGC TGCGCCGCAA AGAAGAAAAT ATTCTCAGTT ATTTCGACAT GCCCATCAGC AATGGCTCGG TGGAAGGCCT CAACAATAAG GCTAAAGTCA TTAGTCACAG AGCATACGGG TTCAGGTCGG CCAAGAACTA CATCCGGAAT CTGTACCATT GCATGGGCGG GCTACCTGAA CCCCAAATTA TGCACAGATT TGTGTGA
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Protein sequence | MLVSQLTKLT LDIQGFRVGR VQGDTSGITV DIAPDRRHLL FCSRCGSAAK YRDTLTSRYF RHVPLWGIPV WLRYSPRRVR CGHCGVKVEY FPWSTGKHRF TTAFAHFLAS WARLLPWKHV AQLFGCSWGT VAAAVDQIVE YGLAHQDLSN LTHIGIDEIS REKGQVYLTN VYDLNTSRLV WSGEKRTKAT ITNFFTSLGP SKIDKLEGVC CDMWEPYTQV IQDKAPKATM VFDKFHIVRH LNEAVDQVRR DEIREKGQKH KDLVKDTRYI WLKNPWNLTD KQASRLSALE KLNLKINRAY LLKESFRQFW SYECRTSAKD FLDKWFWWAT HSRLKPMRNF AWMLRRKEEN ILSYFDMPIS NGSVEGLNNK AKVISHRAYG FRSAKNYIRN LYHCMGGLPE PQIMHRFV
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