| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1997 |
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| Symbol | |
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| ID | 8419842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2295167 |
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| End bp | 2296390 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645038585 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003198859 |
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| Protein GI | 258406117 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACA ACTACAAGGC CATAAACGGT ACAGGAAACT CGGTAAATGG CTTCATTGAG
GCCACAAGCC CATATGAGGC CCAGGAAAAG CTGGCCAGCC AAGGATACAT TCCCCAGAAA
GTGTCCCCGG CCAAAAGCTC CTCTTTTTCC TCCCTCAATG GAGTGGAAGA ACGCCTTAAT
CTGATGCTGT CCACAGTCAA GACCCCGGAA CTCATCTTGT TTACTAAGCA GTTTCGGACC
CTGTTCAACG CCGGCATCAA CATAACCAAC TTGCTGCAAA TCTTGGAAGA GCAAACTGAA
AATCTGAAGC TCAAAAAAGC CGCAGCCGCC ATTGGCCAGG ATATCCAAGG CGGGATCTCT
TTGAGCGAGG CTTTCGTCAA GCATCCCAGA ATTTTTTCCA ACCTGTACTG CAGCATGATC
CAGGCTGGGG AGGATAGTGG TCGGCTGGGC GAAGTCCTGG ACCGGCTCGT GTACCTCTTG
CAGCATGAGC ACAAGGTGCG CTCCGATATC AAAAGCGCCA CCCGCTATCC CAAGATCGTG
CTCGTAGCCA TGTTTATTGC CTTTTTATTT TTGCTCACCT TCATTCTGCC CCAATTCATT
GAAATATTTG AACAGGCCGG CGTGGCCTTG CCCCTGCCCA CCCGGATCAA TATTGCCCTG
TACGAACTTA TCTTGGGCTA TTGGCCGGTC CTTGTGACAG GATCCGCTTT GGCCTTTGTT
GGATTACAGA TGTACCTCAA GACCTCCACA GGCCAGTACC ACAAGGATTG GCTATTCCTG
AAGTTGCCCC TTGTCGGGTC GGTTTTTCAG AAAGGCGCCA TGGCCCGGTT TGCCAATATC
TTTTCCATCC TCCAGGCCAG TGGCGTGTCG GTTTTGAATA CCTTGTCCGT CCTGTCTGGG
ACCATTGGCA ACGCTGCCAT TTCCCGGGAG TTTGCCAAGA TTCAAGATCA GCTCCGGGAG
GGGAGAGGGA TATCGACACC GTTGAAATCC GCGAAGTATT TCACGCCGAT GGTCATCAAT
ATGGTGGCTG TAGGCGAAGA GTCCGGGAAT CTGGACGAGA TGCTCAGCGA GATTTCCTCG
CATTACGACG ACGAAGTGGA TTTTGCAGTC AAACGCATGG CTGACAACCT GGGCCCGGTT
CTGATCGCCC TCTTGGCAGT GCTGGTGGGA TTTTTTGCCG CCTCAGTATT TTTGCCCATG
TGGGATTTGG CGAAGACTAT TTAA
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| Protein sequence | MQYNYKAING TGNSVNGFIE ATSPYEAQEK LASQGYIPQK VSPAKSSSFS SLNGVEERLN
LMLSTVKTPE LILFTKQFRT LFNAGINITN LLQILEEQTE NLKLKKAAAA IGQDIQGGIS
LSEAFVKHPR IFSNLYCSMI QAGEDSGRLG EVLDRLVYLL QHEHKVRSDI KSATRYPKIV
LVAMFIAFLF LLTFILPQFI EIFEQAGVAL PLPTRINIAL YELILGYWPV LVTGSALAFV
GLQMYLKTST GQYHKDWLFL KLPLVGSVFQ KGAMARFANI FSILQASGVS VLNTLSVLSG
TIGNAAISRE FAKIQDQLRE GRGISTPLKS AKYFTPMVIN MVAVGEESGN LDEMLSEISS
HYDDEVDFAV KRMADNLGPV LIALLAVLVG FFAASVFLPM WDLAKTI
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