Gene Dret_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1967 
Symbol 
ID8419812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2254155 
End bp2254658 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content58% 
IMG OID645038555 
Productadenylylsulfate reductase, beta subunit 
Protein accessionYP_003198829 
Protein GI258406087 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID[TIGR02060] adenosine phosphosulphate reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0419652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCT ATGTCAATCC GGAAAAGTGC GATGGCTGCA AGGGTGGCGA AAAGACGGCC 
TGCATGTACA TTTGTCCGAA CGATCTGATG ATCCTGGACG AAAAAGAAAT GAAGGCCTTC
AACCAGGAGC CTGAGGCTTG CTGGGAATGC TACTCCTGCG TCAAGATCTG CCCCCAGGGC
GCGATCACCG CACGTCCCTA CGCTGACTTC GCTCCCTTGG GCGGCACCAG CATCCCGCTG
CGCAGCGCCG AGGACATCAT GTGGACCGTT CAGTTCCGCA ACGGCGAAGT AAAGCGCTTC
AAATTCCCCA TCCGTACCAC TGCGGAAGGC TCCATCAAAC CGTTCGAGGG CAAGCCCGAG
CCGGGCGATT TGGACAGTGA ACTCCTGTTC ACCGAGGCCG AACTGCCCAC GCCGAAGGAA
CTCCTGAACA AGCGTTTCGA TTGTCAGGAT GAAGACTTGA CTCAGTGCTG GCTGGATACA
GCCTGCGCCG GCGCCAACCG GTAG
 
Protein sequence
MPTYVNPEKC DGCKGGEKTA CMYICPNDLM ILDEKEMKAF NQEPEACWEC YSCVKICPQG 
AITARPYADF APLGGTSIPL RSAEDIMWTV QFRNGEVKRF KFPIRTTAEG SIKPFEGKPE
PGDLDSELLF TEAELPTPKE LLNKRFDCQD EDLTQCWLDT ACAGANR