| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1964 |
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| Symbol | |
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| ID | 8419809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2248215 |
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| End bp | 2250515 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038552 |
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| Product | methyl-viologen-reducing hydrogenase delta subunit |
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| Protein accession | YP_003198826 |
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| Protein GI | 258406084 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0030199 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAGA AGATCGGTAT TTACTTTGAC GAGGCGAGCG TCAATGGCAT GGTCAACTTT
GATGCCCTCG CGCAAAAGTT AGCGAACAAG TGGGGCGATA CCTGTCCCGT GGTCAAATCA
CACCCGAACC TGGCCTCTGA CGAAGGCCGG AAGCTGATTC AGGCGGATAT CGATGCGGGA
ACCATCGATG GGGTCTGTAT TTGCGGGACT TCGCCGCGGA TGGATTGGGA TCTCTACGAT
TTCGGTTCAA ACGTGGTCGT TGATCGGGTC AATCTCCGCG AAATCTGTGT CTATGCCTAC
CGCAACCCGG ACGGATCCGA ACTCGATCCC AGCGCTGAGC CGCCGGAATT GCTGCAGGAG
ATGGCCCGCG ATTATATCAA TATGGGCGTG GTCAAACTGC GCAACATGAA CATCCCCAAT
GCGGAGGAAC TCGACTCCGT CAAGCGGGTC CTTGTCCTCG GCGGCGGCTG GAGCGGATTG
ACCGCCGCTG TCAATGCGGC TCAGGCCGGC TATGAAGTCG TGGTGGTCGA AAAGGACAAG
CAGCTTGGCG GCTATGCCGG TAAAATGCAC AAGACTATCC CCTTTGCCGC GCCGTATGCG
CAGGCCCATG AGACCGGGGT CGAACAGAAG ATCAGCGCTG TTCAGGGCAA CGACAAGATT
ACGGTCTATA CCGGCAGCAA GCTCGAAAAA ATTGCCGGAC AGCCCGGGGA TTTCGAGGCC
ACCTTGAACA CCGGATCCGG TCAGGAAACG GTCAAGGTCG GCGCAGTCGT CGTGGCCACC
GGTTGGGCCG CGCAGGATGA CAAGTTCCTG GCTCCGTTCG GATATGGCTC TCTGCCCAAC
GTGGTGACCT CCATGCAGGT CGAGGAGATG GCCAAGGAAG GGACGATCAA ACGTCCCAGC
GATGGCAAGA CGCCGCAAAG CGTCCTCTTT TTGACCGGCT TTGGGGACAA GCTCGAGCAG
TTCGCCGAAG AGGAAAAGGC CCAGGCCGAA GCGGAAGCCA AGAAGGCCGA GCAGCCCAGC
GACGATGATG AACCGGCTAT TGCCGAAGAG TTCAAGAAGA CCGAATCCTA TCGGCACCTG
CCCTATACCT CGGAGATCAC CTCTCTGACC GCGTTGAAGC AGGCCCGGTA CGTTCGCGAA
ATGGCTCCGG CCTCGATGGC CTACATGGTC TATGAGCACA TGATGGTCCC TGGCGTGAAT
GAGCTCTACT ACAAGTCCGC TCAGGACGAT CCGGGCATCA TGCTGACCAA AGGTGATATC
GGGGCCATCA AGGAAGGACC GGATGGCAAA GTCCAGGTCG AGGTCTTCAA CACCCTTATT
GGCGAAGACA TCCTCCTCGA AGTGGACATG CTCGTGGTCC CGACCGCCAT GGTTCCGACG
ACGGCCCTCG AACCGGTGAT CCAATTGCAA TACCGCCAGG GCGAGGCGTT CCCGGATCTC
GAACTCTTCG ACGGCTTTGC CGATTCGAAC TATATCTGCT TTCCCTACGA GACCCGGCGG
ACAGGCATCT ATGCCGCCGG CTCCGTGCGT CAGCCCATGA CTCTGGCCAC ATCAGAGACC
GATGCCCTGG GCGCGGCGCT GAAATCGATC CAATGCATCG AATCGGTCAA CCGGGGTATG
GCTGTCCATC CGCGCTCCGG GGACATGACC TATCCGATCT TCAACTTCAC CCGGTGCACG
CAGTGTAAGC GGTGCACCGA AGAGTGCCCC TTTGGCGCCT TGGACGACGA CGAAAAGGGA
ACGCCGTTGC CGAACCTGGC CCGGTGCCGC CGTTGCGGGA CCTGCATGGG CGCTTGCCCG
GAACGTGTCA TTTCCTTTGA CAACTACGGT GTCGGACAGA TCGGCTCCAT GATCCGTGAG
ATCAACGTTC CGGATGAGAT GGAGACCGAA GGTCCCCGCA TCCTGGTTCT GGCCTGTGAA
AACGATGCCT ATCCCGCTCT GGACATGGCT GCCATGCGCG GCAAGCATTG GTCGCCGTAT
GTCCGTTTCA TCCCGGTCCG CTGCCTTGGT TCGGTGAACA CCATCTGGGT GGCTGATGCC
ATGGGCAAAG GGATCGACGG TGTCCTCCTG TTGGGCTGCA AATACGGTGA CGACTACCAA
TGCCACTTCG TCAAAGGAAG TGAGCTCTGC AGTCGCCGGA TGCAGAACAT CGGGGAAACG
CTGGATCGGC TCGGTGTGGA GAAAGAGCGC GTGGTGCAGA AGGAAGTCGC TATCGACGAC
TACAATATCG TGCCTGAGCT CATAGATTCA TTTGTGGACT ATGTGACCGC ATTGGGACCG
AATCCGTACA AGGGCTTCTA G
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| Protein sequence | MAEKIGIYFD EASVNGMVNF DALAQKLANK WGDTCPVVKS HPNLASDEGR KLIQADIDAG
TIDGVCICGT SPRMDWDLYD FGSNVVVDRV NLREICVYAY RNPDGSELDP SAEPPELLQE
MARDYINMGV VKLRNMNIPN AEELDSVKRV LVLGGGWSGL TAAVNAAQAG YEVVVVEKDK
QLGGYAGKMH KTIPFAAPYA QAHETGVEQK ISAVQGNDKI TVYTGSKLEK IAGQPGDFEA
TLNTGSGQET VKVGAVVVAT GWAAQDDKFL APFGYGSLPN VVTSMQVEEM AKEGTIKRPS
DGKTPQSVLF LTGFGDKLEQ FAEEEKAQAE AEAKKAEQPS DDDEPAIAEE FKKTESYRHL
PYTSEITSLT ALKQARYVRE MAPASMAYMV YEHMMVPGVN ELYYKSAQDD PGIMLTKGDI
GAIKEGPDGK VQVEVFNTLI GEDILLEVDM LVVPTAMVPT TALEPVIQLQ YRQGEAFPDL
ELFDGFADSN YICFPYETRR TGIYAAGSVR QPMTLATSET DALGAALKSI QCIESVNRGM
AVHPRSGDMT YPIFNFTRCT QCKRCTEECP FGALDDDEKG TPLPNLARCR RCGTCMGACP
ERVISFDNYG VGQIGSMIRE INVPDEMETE GPRILVLACE NDAYPALDMA AMRGKHWSPY
VRFIPVRCLG SVNTIWVADA MGKGIDGVLL LGCKYGDDYQ CHFVKGSELC SRRMQNIGET
LDRLGVEKER VVQKEVAIDD YNIVPELIDS FVDYVTALGP NPYKGF
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