Gene Dret_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1955 
Symbol 
ID8419800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2238023 
End bp2239114 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID645038543 
ProductRadical SAM domain protein 
Protein accessionYP_003198817 
Protein GI258406075 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.356683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC ACGGTAATGC CTCTGTACCT GATTTGCGCT TAATCGCCTG GGAAGTCACC 
CGGTCGTGCA ACCTTGCTTG CAAACATTGC CGGGCCGAGG CCCATCTGGA TCCCTACCCT
GGCGAATTGA CCACCGGCGA GGCCAAAAAC CTGATCGACA CCTTCCCCCA GACCGGAAGT
CCGATCATTA TCTTCACTGG CGGGGAGCCC CTGCTGCGTC CCGACCTCTT CGACCTGGTC
CGCCACGCGA AATCCAAGGA CCTGCGCTGC GTCATGGCCC CGAACGGGAC CTTGATCACC
CCGGACAACG CCCGGGAGAT GGCTGAATCC GGGATTGAAC GCGTGTCCAT CTCCATTGAC
GGTCCGGACA GCGCCAGCCA CGACGCCTTC CGCGGCACCC CCGGCGCCTT TGACCAGGCC
ATGCAGGGCA TCGACTATCT CAAGGCCGCG GGGATCCCGT TTCAAATCAA CACCACGGTC
ACCCGCAACA ATATGGGCCA ATTCAAGGAT ATCTTTCAGC TGGCCCAGCG GCTGGGAGCG
GTGGCTTGGC ATATCTTCCT CCTCGTTCCC ACCGGGCGGG CCGCGGACCT GAAAGAAGAA
ATCATCACCG CAGCAGAATA CGAATCGGTG CTGAACTGGT TTTACGATTT TCGTAAGACC
ACCGACATGC AGCTCAAGGC CACCTGCGCC CCGCATTACC ACCGGATCCT GCGCCAACGG
GCCAAGGAAG AAGGGGTCGA GGTCACCTTT GAGAACTTCG GGCTCGACGC CGTGAGCCGG
GGGTGCCTGG GCGGGATCGG TTTCTGCTTT ATTTCGCACA CCGGTCAGGT CCAGCCGTGC
GGATACCTCG ATCTCGACTG CGGCCAGGTC AAGCAGACCC CCTTTCCGGA AATCTGGGCC
AATTCGCCCC AGTTCCAGAA TCTGCGCACG CCGCAGGCCT ACACCGGCAA GTGCGGCGTC
TGCGAATACC ATAAAGTCTG CGGTGGCTGC CGGGCCCGGG CCCAGACCAT GCGCGGCGAC
TACCTCGCTG AAGAACCGCT GTGCTCCTAC ACTCCACAGC GGTTGCGCGA GGAGCCCGTT
TCTCAGGGAT GA
 
Protein sequence
MTHHGNASVP DLRLIAWEVT RSCNLACKHC RAEAHLDPYP GELTTGEAKN LIDTFPQTGS 
PIIIFTGGEP LLRPDLFDLV RHAKSKDLRC VMAPNGTLIT PDNAREMAES GIERVSISID
GPDSASHDAF RGTPGAFDQA MQGIDYLKAA GIPFQINTTV TRNNMGQFKD IFQLAQRLGA
VAWHIFLLVP TGRAADLKEE IITAAEYESV LNWFYDFRKT TDMQLKATCA PHYHRILRQR
AKEEGVEVTF ENFGLDAVSR GCLGGIGFCF ISHTGQVQPC GYLDLDCGQV KQTPFPEIWA
NSPQFQNLRT PQAYTGKCGV CEYHKVCGGC RARAQTMRGD YLAEEPLCSY TPQRLREEPV
SQG