Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1955 |
Symbol | |
ID | 8419800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2238023 |
End bp | 2239114 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645038543 |
Product | Radical SAM domain protein |
Protein accession | YP_003198817 |
Protein GI | 258406075 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.356683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACC ACGGTAATGC CTCTGTACCT GATTTGCGCT TAATCGCCTG GGAAGTCACC CGGTCGTGCA ACCTTGCTTG CAAACATTGC CGGGCCGAGG CCCATCTGGA TCCCTACCCT GGCGAATTGA CCACCGGCGA GGCCAAAAAC CTGATCGACA CCTTCCCCCA GACCGGAAGT CCGATCATTA TCTTCACTGG CGGGGAGCCC CTGCTGCGTC CCGACCTCTT CGACCTGGTC CGCCACGCGA AATCCAAGGA CCTGCGCTGC GTCATGGCCC CGAACGGGAC CTTGATCACC CCGGACAACG CCCGGGAGAT GGCTGAATCC GGGATTGAAC GCGTGTCCAT CTCCATTGAC GGTCCGGACA GCGCCAGCCA CGACGCCTTC CGCGGCACCC CCGGCGCCTT TGACCAGGCC ATGCAGGGCA TCGACTATCT CAAGGCCGCG GGGATCCCGT TTCAAATCAA CACCACGGTC ACCCGCAACA ATATGGGCCA ATTCAAGGAT ATCTTTCAGC TGGCCCAGCG GCTGGGAGCG GTGGCTTGGC ATATCTTCCT CCTCGTTCCC ACCGGGCGGG CCGCGGACCT GAAAGAAGAA ATCATCACCG CAGCAGAATA CGAATCGGTG CTGAACTGGT TTTACGATTT TCGTAAGACC ACCGACATGC AGCTCAAGGC CACCTGCGCC CCGCATTACC ACCGGATCCT GCGCCAACGG GCCAAGGAAG AAGGGGTCGA GGTCACCTTT GAGAACTTCG GGCTCGACGC CGTGAGCCGG GGGTGCCTGG GCGGGATCGG TTTCTGCTTT ATTTCGCACA CCGGTCAGGT CCAGCCGTGC GGATACCTCG ATCTCGACTG CGGCCAGGTC AAGCAGACCC CCTTTCCGGA AATCTGGGCC AATTCGCCCC AGTTCCAGAA TCTGCGCACG CCGCAGGCCT ACACCGGCAA GTGCGGCGTC TGCGAATACC ATAAAGTCTG CGGTGGCTGC CGGGCCCGGG CCCAGACCAT GCGCGGCGAC TACCTCGCTG AAGAACCGCT GTGCTCCTAC ACTCCACAGC GGTTGCGCGA GGAGCCCGTT TCTCAGGGAT GA
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Protein sequence | MTHHGNASVP DLRLIAWEVT RSCNLACKHC RAEAHLDPYP GELTTGEAKN LIDTFPQTGS PIIIFTGGEP LLRPDLFDLV RHAKSKDLRC VMAPNGTLIT PDNAREMAES GIERVSISID GPDSASHDAF RGTPGAFDQA MQGIDYLKAA GIPFQINTTV TRNNMGQFKD IFQLAQRLGA VAWHIFLLVP TGRAADLKEE IITAAEYESV LNWFYDFRKT TDMQLKATCA PHYHRILRQR AKEEGVEVTF ENFGLDAVSR GCLGGIGFCF ISHTGQVQPC GYLDLDCGQV KQTPFPEIWA NSPQFQNLRT PQAYTGKCGV CEYHKVCGGC RARAQTMRGD YLAEEPLCSY TPQRLREEPV SQG
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