| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1954 |
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| Symbol | |
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| ID | 8419799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2236942 |
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| End bp | 2237919 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038542 |
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| Product | Porphobilinogen synthase |
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| Protein accession | YP_003198816 |
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| Protein GI | 258406074 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.635001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA CAGACTTCTT CAGAGGCCGT CGTTTGCGAC AGACGGCCAC AATGCGAGCC
CTGGTCCGCG AAACCGTGCT CCGGCCCGAA GACCTGATTC AGCCCTATTT CGTGGCCGAG
GGCGACCGGC ACGCCAGCCG GCCTATCGGG TCCATGCCCG GCCAGCACCA ACTCGGTCTG
GAGGCCCTGA CGGCCCGGGT GAGTCAGGCC GTGGACAACG GCCTCCACGC GGTCATGCTC
TTCGGCATCC CTGAGTCCAA GGATCCGCAA GGGTCTCAAG CCTATGCCCC GGAGGGCATC
GTCCAGGAAG CGGTCCGCCG CCTCAAAGCT GCCGTGCCGG AGCTGACGGT CATCACTGAC
GTCTGCCTCT GCGAATTCAC CTCGCACGGC CATTGCGGTC TCGTGGACGG CCAGCAGGTC
CTCAACGACC CGACCCTGGA ACTCTTGGCT GCCACCGCTG TCTCCCACGC CGAGGCCGGA
GCGGACATCG TCGCCCCCTC GGACATGATG GACGGACGGG TTCAGGCCAT CCGGCTCGCT
TTGGATACCG CCGGTTTTCA ACAGACACCG ATCATGTCCT ATGCGGTCAA ATACGCTTCG
GCCTTCTACG GCCCGTTTCG GGAGGCGGCG GAAAGCGCGC CGCAATTCGG CGACCGCAAG
ACCTATCAAA TGGATCCGTC CAACGCTCGG GAAGGGCTCC GCGAAGCCGA GGCGGACACC
GCTGAGGGCG CTGATTTTCT GATGGTCAAA CCGGCTCTGG CCTACCTCGA TATTCTGAGT
CAACTGCGGC AGCGCAGTAC ACTTCCCCTG GCCGCCTATC ACGTCAGCGG CGAATACAGC
CTGATCAAGG CGGCTGCCCA GCAGGGGTGG ATCGATGAAC AGGCCGTGGC CCTGGAATCC
CTGACAAGCA TCAAACGGGC CGGCGCTGAT CTGATCCTGA CCTATTTTGC GGAACAGGCT
CTGGACTGGT TGTCCTGA
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| Protein sequence | MAKTDFFRGR RLRQTATMRA LVRETVLRPE DLIQPYFVAE GDRHASRPIG SMPGQHQLGL
EALTARVSQA VDNGLHAVML FGIPESKDPQ GSQAYAPEGI VQEAVRRLKA AVPELTVITD
VCLCEFTSHG HCGLVDGQQV LNDPTLELLA ATAVSHAEAG ADIVAPSDMM DGRVQAIRLA
LDTAGFQQTP IMSYAVKYAS AFYGPFREAA ESAPQFGDRK TYQMDPSNAR EGLREAEADT
AEGADFLMVK PALAYLDILS QLRQRSTLPL AAYHVSGEYS LIKAAAQQGW IDEQAVALES
LTSIKRAGAD LILTYFAEQA LDWLS
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