Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1953 |
Symbol | |
ID | 8419798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2235648 |
End bp | 2236832 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038541 |
Product | Radical SAM domain protein |
Protein accession | YP_003198815 |
Protein GI | 258406073 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.66123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAA TATCCAAATT GTATTGTGAC GCCATCGAAC CGTCCGACGC CCTGCGCTAT GGCCGCCAAT CCGGAAAACT CCCCTCGCAC CTCCTGCAAT TCTCCGAGGA CAAAAAACCG GTGGTGGTCT GGAACATGAC CCAACGGTGC AACCTCAAAT GCGTGCATTG CTATGCCCAA GCCATCGACC CCGAGGGCAA GGACGAAATC AGCACCGACC AGGGCAAGGC GATCATCGAC GACCTCGCTG CCTTCGGCGC CCCGGTCATG CTCTTTTCCG GCGGCGAACC CCTGGTGCGC AAAGACCTGC CAGAACTCGC CTCTTACGCC GTGTCCAAAG GCATGCGCGC GGTCATTTCC ACCAACGGCA CCCTGATCAC CAAGGACAAG GCCCGGGAAC TCAAATCCAT CGGCCTGTCC TATGTCGGCA TCTCCCTGGA CGGCGGTGAA GCCACGCACG ACAAATTTCG CGGTGTGCCG GGCGCTTTCA AAAAAGCCAT GGAAGGGGTC GACAATTGCC AGGCCGAAGG GCTCAAGGTC GGCCTGCGTT TCACAGTCAA CAAGCGCAAT TTCGAAGAAG TCCCGACCAT CTTCCACATT CTCAGGGAAA AGGAGATCCC CCGGGTCTGT TTTTACCACC TTGTGTACTC CGGGCGCGGC TCGGAACTGA TCAAGGAAGA CCTGACCCAC GAGCAGACCC GCCGTCTGGT CGATCTGATC ATGGACGAAA CCAAGGCCCT GTTCGACGAC GGGCTTCCCA AAGAGGTCCT GACTGTGGAC AACCATGCCG ACGGCCCCTA CGTCTACCAG CGTCTGCTGC AGGAAAATCC GGAACGGGCC AAACAGGTCA TGGAATTGCT CCAATTCAAC GAAGGCAACA ATTCCGGCCG TGGTATCGGG TGCATCTCCT GGGACGGACA GGTCCACGCC GACCAGTTCT GGCGCATCCA CACCTTCGGC AATGTCTTGG AGCGGCCGTT TTCCGAGATC TGGACCGACC CCTCCATTGA GTTGCTGCAC AAGCTCAAGG ACAAAAAGGC CCATGTCGGC GGACGCTGCG CCAAGTGCCA ATATCTCAAC ATCTGCGGCG GCAACTTCCG CGCCCGGGCC GAGGCCTATT ACGGAGATAT CTGGGCCCAG GACCCGGCCT GCTATCTGAC GGACGAAGAA ATCGGCATCT CCTAG
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Protein sequence | MIGISKLYCD AIEPSDALRY GRQSGKLPSH LLQFSEDKKP VVVWNMTQRC NLKCVHCYAQ AIDPEGKDEI STDQGKAIID DLAAFGAPVM LFSGGEPLVR KDLPELASYA VSKGMRAVIS TNGTLITKDK ARELKSIGLS YVGISLDGGE ATHDKFRGVP GAFKKAMEGV DNCQAEGLKV GLRFTVNKRN FEEVPTIFHI LREKEIPRVC FYHLVYSGRG SELIKEDLTH EQTRRLVDLI MDETKALFDD GLPKEVLTVD NHADGPYVYQ RLLQENPERA KQVMELLQFN EGNNSGRGIG CISWDGQVHA DQFWRIHTFG NVLERPFSEI WTDPSIELLH KLKDKKAHVG GRCAKCQYLN ICGGNFRARA EAYYGDIWAQ DPACYLTDEE IGIS
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