Gene Dret_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1944 
Symbol 
ID8419789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2227683 
End bp2228237 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID645038532 
Productribosome recycling factor 
Protein accessionYP_003198806 
Protein GI258406064 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.757618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCA TTTTTACCGA CGCCAAAAAG CGCATGGAAA AAGCCATCAC GAACCTGGAA 
AAGGAGTTCT CCCGTCTACG GACCGGACGC GCCTCGGCAT CCCTTGTGGA TGGAATCCAG
GTCTCCTACT ACAACACGCC GACACCGCTG AACCAATTGG CGTCCATTTC CATTCCGGAC
GCTCGGACCA TCGCCATTCA ACCCTGGGAC CGCAGCAGCT TCGAGAATAT CGAAAAGGCC
ATCATGCAAT CGGATCTCGG CCTGAATCCG GTCAACGACG GCAAGATCAT CCGCATCAAT
ATCCCGGCTT TGACTGAAGA GCGCCGCAAG GAACTGGTCA AGATCGCCAA GAAGCACACA
GAAGACGCCA AGATCGCCAT CCGCAACATC CGGCGTGACG CCAACGAAGA ACTCAAGAAG
CAAAAGAACG ACAAGACCAT CAGCGAAGAC GACATGCACC GGGGGCAGGA AAAGATCCAG
AAGCTCACCG ATGAATTCGT CGACAAAGCC GAAAAGACGC TGACGGAAAA AGAAAAAGAG
ATCATGGAAA TCTAA
 
Protein sequence
MESIFTDAKK RMEKAITNLE KEFSRLRTGR ASASLVDGIQ VSYYNTPTPL NQLASISIPD 
ARTIAIQPWD RSSFENIEKA IMQSDLGLNP VNDGKIIRIN IPALTEERRK ELVKIAKKHT
EDAKIAIRNI RRDANEELKK QKNDKTISED DMHRGQEKIQ KLTDEFVDKA EKTLTEKEKE
IMEI