Gene Dret_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1942 
Symbol 
ID8419787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2226051 
End bp2226911 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID645038530 
Producttranslation elongation factor Ts 
Protein accessionYP_003198804 
Protein GI258406062 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA CTGCCCAAAT GGTCAAAGAG CTCCGGGAAA AAACCGGGGC CGGAATGATG 
GACTGCAAGA AGGCCCTGCA GGCGGCTGAT GGCGACATGG ACGCCGCGCT CACCGCTCTG
CGGGAAAAGG GACTGGCCAA GGCCCAGAAA AAGGCCGGCC GCTCCACCTC TGAAGGGCTC
ATCACCTTCG CCACCCAGGA CGGCGGCACC AGCGGAGCCC TGTTCGAACT CAAATGCGAA
ACCGATTTCG TGGCCCGCAA CGATCAGTTC ATCAGCATGG CCAAGGACCT GGCCCAGGAA
GTCGCCACCA ACGGCGAACT GCCCGCCAAC GCCGACGAAG AGATCAAGAA ATTCGTCGGG
GTCATCGGGG AAAACATCCA GCCGGGGCGC AGTGAAGTCC TGAAGGTCCA AGCCCCTGCC
GGCCTGATCG GTTCCTACAT CCACGCCAAC GGCAAAATCG GCGTCATGGT CGAACTGCGC
TGCACCAAAT CGGAAGCCGC GCAAAACCAG GCCATGGCCG ATCTGGGCAA GAACATTGCC
ATGCAGGTCG CCGCGGTCAC TCCGCTGAGC ATCAGCCCCG ACGATCTGCC CCAGGAAAAT
ATCGAAGAGG AAAAAGCCAT TTTCCTCAAG CAGGCCCAGG ACGAAGGCAA GCCTGAACAC
ATTGCCGAAA AGATCGTCGA AGGCCGGATC AAGAAATTCT ATAAAGAGGT CTGCCTCTTG
GAGCAGCCCT ACATCAAGGA CGATTCCAAA ACGATCCGCG ATCTGCTCCA GGAAGTGGGC
AAGGAACTCG GCGACGAGAT CACCATCGGC TCGTTCGTCC GACTCGGCCT CGGCGAGGAC
CACGAAGAAG AAACAGAATA A
 
Protein sequence
MNITAQMVKE LREKTGAGMM DCKKALQAAD GDMDAALTAL REKGLAKAQK KAGRSTSEGL 
ITFATQDGGT SGALFELKCE TDFVARNDQF ISMAKDLAQE VATNGELPAN ADEEIKKFVG
VIGENIQPGR SEVLKVQAPA GLIGSYIHAN GKIGVMVELR CTKSEAAQNQ AMADLGKNIA
MQVAAVTPLS ISPDDLPQEN IEEEKAIFLK QAQDEGKPEH IAEKIVEGRI KKFYKEVCLL
EQPYIKDDSK TIRDLLQEVG KELGDEITIG SFVRLGLGED HEEETE