Gene Dret_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1941 
Symbol 
ID8419786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2225261 
End bp2226049 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content59% 
IMG OID645038529 
Productribosomal protein S2 
Protein accessionYP_003198803 
Protein GI258406061 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA TCAAAATGAA GCAGATGCTG GAAACCGGTG TCCACTTCGG ACACCAGACC 
CGCCGCTGGA ACCCCAAAAT GCGCCCCTTT ATCTTCGGCG CCCGCAAGGG GATCCATATC
ATCGACCTCC AACAGACGGT CCAACTATTC CGTCAGGCCC ACGACGTCAT CGTGGACGCG
GTCGCCAACG GCGGAAAAAT CATCTTTGTC GGCACCAAGC GCCAGGCCCA GGAGGCCGTG
GCCGAAGACG CCCAGCGTTG TGGCATGTTC TATGTCACCA ACCGCTGGCT GGGCGGCACG
CTGACCAACT TCCAGACCAT CAAGCACCGC ATCGAACGGC TCAAGCATCT GGAGACCATG
TTCGAAGACG GATCCATCCA CCGGTTCCCG AAAAAAGAAA TCGCCGGGAT GCAGCGCGAA
TTGGATAAAT TGCAGGCCGC CCTGGGCGGG ATCAAAGACA TGGAAGACCT GCCCCAGGTC
GCTTTTGTCA TCGATCCCAA GCGCGAAGAA CTGGCCATCC GCGAATTCCG CAAACTCGGC
ATCCCCATTG TCGCGGTGAC TGACACCAAT TGCGATCCGG ATCAGGTGGA CTACGTCATT
CCCGGCAATG ACGACGCCAT CCGGGCCATC AAGCTCTTTG TGTCCAGCGT GGCTGACGCC
TGCCTCGAAG GCTTGGCACG CCGCGACGAG CAGCCCACGG AAGAACAACT CACAGAAGCA
CCGCAACAGA CTGCCACCGA AGAGCAGGTC GCTGCCGAAA GCGTCGAGAA GAGCGAGGAG
GAAGCCTAA
 
Protein sequence
MAYIKMKQML ETGVHFGHQT RRWNPKMRPF IFGARKGIHI IDLQQTVQLF RQAHDVIVDA 
VANGGKIIFV GTKRQAQEAV AEDAQRCGMF YVTNRWLGGT LTNFQTIKHR IERLKHLETM
FEDGSIHRFP KKEIAGMQRE LDKLQAALGG IKDMEDLPQV AFVIDPKREE LAIREFRKLG
IPIVAVTDTN CDPDQVDYVI PGNDDAIRAI KLFVSSVADA CLEGLARRDE QPTEEQLTEA
PQQTATEEQV AAESVEKSEE EA