Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1937 |
Symbol | |
ID | 8419782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2219266 |
End bp | 2221323 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038525 |
Product | elongation factor G |
Protein accession | YP_003198799 |
Protein GI | 258406057 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA CGCTCCAGAA ACAAAGAACC TTCGCTTTGG TAGGCAACAG CGGCAACGGG AAAACCTCTT TGGCCGAAAT GCTGCTTTTT CAGGCCAATG CTACGACCCG ACTGGGGCAG GTGGACAAGG GGAGTTCAGT ACTGGACTAC GAACCCGAAG AAATGAAGCG TGTTGGGAGC ATCCAGCCCT CTTTCGCCCA TTACACCTGG CAGAAAAACG ATCACTTCTG TATCGACACG CCCGGCGACA CCAATTTCGT CGGCGATCTG CCCTACCTGT TGACAGCCGT AGACAGCGTG GTCTTTGTGG TCGATGCGGT GGACGGGGTC AAGCCTCTGA CGAAGAAATT ATGGTCTGAA GTCCAGAAGG CCGAATTGCC GGCGATCATA GCGGTGAACA AAATCGATCG TGAGCGGGCC GATTTCGACC AGACCTTTGA CGGGCTCTCT TCGATTCTGG GGATCAAACC CGTGCTGACC TATATGCCCA TCGGCGCGGA GAGCGACTTT CGGGGCGTGG TCGACGTCCT GGGCCAAAAG GCTTTCTTCT TCGAAGACGA CGGTTCGGTC AAGGAGGGCG AAATCCCGGC CCAGATGACC GACCAGGTCG AAGAAATCCG GGAAATCACC CTGGAAAACA TTGCCGAAAG CGACGACGAA CTCATGGAGA AATACCTGGA AGAGGGGGAA CTCTCCGACG ACGATGTCCG CAAGGGACTG CACATCGGGG TCTGCAACCG GACCATCGTC CCGGTCTGCG CCACCGCCGC TGCCTCAGGC AAAGGCGGCA CCTTGATACT CAACCTCATC CAGAACCTGC TACCATCGCC CCTGGAACGC GCTGCCTGGA CAGGTACCGA AGGGGAGACC CGGCCGTCCA GCCCTGACGA ACCCACGGCC TGCTTCGTCT GCAAAACCAT TGTCGACCCG TTTTCCGGCC AGCTCAGTAT CCTGCGCGTC CTTTCAGGCA CATTGTCTCC CGACGTCCAA TTGCTCAACC CCGAAAAAGA GAGCAAGGAG AAAATCGGCC ACCTGCAATA TCTGCTCGGC AAACACCAGA CCCCGTGCAA GACCGCTGTG GGTCCCGGCG CCCTGGTTGC AGTGGCCAAG CTCAAGGACA CCGCCACCGG CAACCTCCTC TGCGCTCCTG AGGCTCCCTT TGTGCTCAAC AAACCGGATC TGCCTCCGGC GCTGCTCTCC TATGCCATCG CCGCCAAAGA GAAAGGGGAT GAAGACAAGA TCTTCGGCGC CATCCACAAA ATGCTCGATG AAGACATCAC CCTGCATCTC GACCGCAATG AAGAGACCGG GGACATGCTC CTGTCCGGAA TGGGCCAGTT GCATATCGAG ACCGCCATCG AACGGGTCAA GCGGCGCTAC AAGGTCGAAG TCCAGCTCAA TACGCCCAAG ATTCCCTACC GCGAAACGTT CAAAGGCAAG GCCGACGTCC AGGGCCGGTA CAAGAAGCAG TCCGGCGGCC GCGGCCAGTT CGGGGATTGC TGGATCCGCG TCGAACCGCG CGAACGCGGC GCCGGGTATG AATTTGAAGA CGCCATCGTC GGCGGGGTCA TTCCCAAAAC CTTTATCCCG GCTGTGGACA AGGGGATTCA GGAAACAGCC GGGAAAGGAA TTCTGGCTGG CGCACCTGTG GTCGACTTCA AAGTCACTCT GTACGACGGC TCCTATCACA GCGTCGACTC TTCAGAAATG GCCTTCAAAG TCGCCGGCTC CATGGCCTTC AAAAAGGCCG CGGAACAGGC TGGTCTCAAA CTCCTGGAAC CGGTGGTCCA AATGCATATC GCCGTGCCTG AGGAATATAT GGGCGACATC ATCGGCGACC TTTCCAGCCG GCGGGGCAAG GTCCTCGGAT ACGAGACCAC CCAGGGCATC ACCGAAATCA CCGCCCATGT GCCGATGGCC GAAGTCCTGA AATACGCCCC GGACCTGCGC TCCATGACCG GAGGCCAGGG CACGTTCACC ATGGAATTCG ACCACTACTC CGAATGCCCT TCGAACATCG AGGAAAAAGT GGTTGCCGAA AACCAGCAGA CCGAATGA
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Protein sequence | MQETLQKQRT FALVGNSGNG KTSLAEMLLF QANATTRLGQ VDKGSSVLDY EPEEMKRVGS IQPSFAHYTW QKNDHFCIDT PGDTNFVGDL PYLLTAVDSV VFVVDAVDGV KPLTKKLWSE VQKAELPAII AVNKIDRERA DFDQTFDGLS SILGIKPVLT YMPIGAESDF RGVVDVLGQK AFFFEDDGSV KEGEIPAQMT DQVEEIREIT LENIAESDDE LMEKYLEEGE LSDDDVRKGL HIGVCNRTIV PVCATAAASG KGGTLILNLI QNLLPSPLER AAWTGTEGET RPSSPDEPTA CFVCKTIVDP FSGQLSILRV LSGTLSPDVQ LLNPEKESKE KIGHLQYLLG KHQTPCKTAV GPGALVAVAK LKDTATGNLL CAPEAPFVLN KPDLPPALLS YAIAAKEKGD EDKIFGAIHK MLDEDITLHL DRNEETGDML LSGMGQLHIE TAIERVKRRY KVEVQLNTPK IPYRETFKGK ADVQGRYKKQ SGGRGQFGDC WIRVEPRERG AGYEFEDAIV GGVIPKTFIP AVDKGIQETA GKGILAGAPV VDFKVTLYDG SYHSVDSSEM AFKVAGSMAF KKAAEQAGLK LLEPVVQMHI AVPEEYMGDI IGDLSSRRGK VLGYETTQGI TEITAHVPMA EVLKYAPDLR SMTGGQGTFT MEFDHYSECP SNIEEKVVAE NQQTE
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