| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1935 |
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| Symbol | |
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| ID | 8419780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2216869 |
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| End bp | 2217996 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038523 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003198797 |
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| Protein GI | 258406055 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.779003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGATTTCGCC TCCGGCGCAG TTGCCCTCCT GGTTGCAAAC GATCAGCGAG
GTGGTGGTCG ATCCCTCGGT GCGCACCACC CCGCTGGCCG CCAGGGTGCG TGAGCGACTG
CCCCATGTGC GTTGGACGGT GCTTGACGAG GACGGTGCTG TGCCGGCGTG GGGACAGGAG
GAACAGGTCG TCTATCTCAA GCACTACAAG GGCCGCTTCC TGCGTTTTTG CCCCGGCACT
AAGGCCTACC GGTGTTGCGG GTACCGGATC GTGCATATCG GAGAGAATTG TCCCCTGTCG
TGTTCCTACT GTATTTTGCA GGCGTATTTT CAGGACCGGA TGCTCAAGGT CTGGGCCAAC
CAGGAGGACC TGTACACCGA ACTCGACCGG GCCTTTGCCG CTAATCCGGA CAAGCGGTAC
CGGTTGGGCA CTGGGGAGTT CACGGACTCG CTGGCCCTGG AACCGCTCAC CGGGTACAGC
CGTGATCTGG TTGATTTTCT GGGGCGCTAT CCCAATGTCT GCCTGGAACT CAAAAGCAAA
GTCATCGATC TGAGTTGGAT GACGGCGGTC CGAGATCCGC GCCGGGTCCT GCCGGCGTGG
TCGCTCAACG CCCCGGCGAT CCACGAAGAG CAGGAACACA GGACGTCGAC ACTCACGGAG
CGGCTGGAGG CAGCGCGCGA ATGCGTCCGC CACGGCTTTC GGGTCTGTTT GCATTTTGAT
CCGATCATCC GTTATCCGGG ATGGGAAACA GGGTATGACC GTATCGTGGA TATGATTTTC
GAGTATCTCC GCCCTGCGGA TATTGCCTAC ATGAGTTTGG GGTCATTCCG CTGTATGCCG
GAGCTGAAAT CGATCATCGA TCGTCGCCAC CCCCAGGCGC GGTATATCTA CGACGAATTT
ATCACCGGAG CGGACGATAA ATTGCGCCTG CTCAGACCTC TTCGCGTCGA ACAATTCCGG
CGCATTGTCA GCCGGCTCCA GAAATGGGGG ATGCGGGAGC AGCTCTATTT CTGCATGGAG
TCTGATACCG TCTGGCAGCA GGTCTTCGGG TATACCCCTC GGCAACTCGG GGGGCTGCAA
AACCATCTGC TGCGCCGGAG TTTTGGTGAG GAGTCGGATG CCCTGTAA
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| Protein sequence | MSAAISPPAQ LPSWLQTISE VVVDPSVRTT PLAARVRERL PHVRWTVLDE DGAVPAWGQE
EQVVYLKHYK GRFLRFCPGT KAYRCCGYRI VHIGENCPLS CSYCILQAYF QDRMLKVWAN
QEDLYTELDR AFAANPDKRY RLGTGEFTDS LALEPLTGYS RDLVDFLGRY PNVCLELKSK
VIDLSWMTAV RDPRRVLPAW SLNAPAIHEE QEHRTSTLTE RLEAARECVR HGFRVCLHFD
PIIRYPGWET GYDRIVDMIF EYLRPADIAY MSLGSFRCMP ELKSIIDRRH PQARYIYDEF
ITGADDKLRL LRPLRVEQFR RIVSRLQKWG MREQLYFCME SDTVWQQVFG YTPRQLGGLQ
NHLLRRSFGE ESDAL
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