Gene Dret_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1931 
Symbol 
ID8419776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2213275 
End bp2213706 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID645038519 
Productthioesterase superfamily protein 
Protein accessionYP_003198793 
Protein GI258406051 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AGACAAACGC TTTTCCCCAG CCGGAATGCA CCTGGGTCCA CCGTGTCTCC 
TACGGCGAAA CCGACGCTAT GGGCGTGGTT TATTACGCCA ATTATCTGCA CTGGTTCGAA
CAGGCACGCT CGTTTTTCAT TCGCGAACAC GGGATGAGCT ACAAGGAGAT CGAAGCCCGC
GAAGTCGCCT TGCCGGTTCG CGAAGCCCAC TGTCGCTACC GCAGCCCAGC CGGCTACGAG
GACCAAATCG CGGTACGCAC CGGGATCAGC GAATGGCGCC GGGCCTCCTT GACCTTTGTC
TACCACATCC ACAACACAAG CCGCGGCAAC GTCCTCATGG CCACCGGGAC CACCCAGCAT
GCCTGCACCA ATCCCAGCGG CCGGCCCATG CCGGTGCCCC AATGGCTCAA AACCATCGTA
CTCAGCCCAT GA
 
Protein sequence
MSAETNAFPQ PECTWVHRVS YGETDAMGVV YYANYLHWFE QARSFFIREH GMSYKEIEAR 
EVALPVREAH CRYRSPAGYE DQIAVRTGIS EWRRASLTFV YHIHNTSRGN VLMATGTTQH
ACTNPSGRPM PVPQWLKTIV LSP