Gene Dret_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1923 
Symbol 
ID8419766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2204371 
End bp2204835 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID645038509 
ProductCBS domain containing protein 
Protein accessionYP_003198785 
Protein GI258406043 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAG TGCGCGATGT CATGACTCCC GACCCGTATG CCATGCGGGA TTCGGACGAC 
CTCTACCTGG CACGTTCAAT CATGCAACTC GGCCGTATCC GGCATATCCC CATCGTCGAC
GAGGACAATC ATTTCCGCGG CCTGGTCACG CATCGCGATA TCCTTGAGGC CACGGTGTCC
AAACTGGCGG AGGTCGACCA CTCCACACAG GCCGAGCTGG ACGCCAGCAT TCCCATTGAG
GCCATCAAAC GCACCGACGT CAAGACCGTC ACCCCGGATA CCTCACTGCG CGATGCAGCG
GAAATCCTCT ACAAACACAA ATACGGCTGC CTGCCGGTCG TGGAAGGAGA AATCCTGGTC
GGCATCCTGA CCGAGGCGGA TTTCCTCAAA TTGACCATGC AGCTCATGGA CAGCCTTGAC
GCGGACGGCA GCACCGAGTT CACCCCCACC CAGCGGACAC CCTGA
 
Protein sequence
MWKVRDVMTP DPYAMRDSDD LYLARSIMQL GRIRHIPIVD EDNHFRGLVT HRDILEATVS 
KLAEVDHSTQ AELDASIPIE AIKRTDVKTV TPDTSLRDAA EILYKHKYGC LPVVEGEILV
GILTEADFLK LTMQLMDSLD ADGSTEFTPT QRTP