| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1909 |
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| Symbol | |
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| ID | 8419752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2192636 |
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| End bp | 2193721 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645038495 |
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| Product | metalloendopeptidase, glycoprotease family |
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| Protein accession | YP_003198771 |
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| Protein GI | 258406029 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00508883 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.334757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTC TGGGCATTGA GACCTCTTGC GACGAAACCG GCCTGGCCGT GGTTGAGGAG
GGGCAGCTGA TCGCCCAGGA ACTGGCCACG CAAGGGGCGA TGCACTCGGT TTTCGGGGGG
GTGGTTCCGG AACTGGCCTC CCGGGAACAC CTCCGGGTCC TGGACCCGTT ATGGCAGTCC
TTGTTGCAGC GCACCGGCCT GGCCCCGGAG GATTTCGACG TTGTGGCCGT GGCTCGCGGC
CCCGGACTTT TGGGCAGTCT GCTGGTCGGT CTCGGCTTTG CCAAAGGGCT GGCCCTGGCG
ACTGGGGCGC GGCTGATTGG GGTCAACCAT CTGCTGGGAC ACCTCCTGGC CCCGGGACTG
GAGCGGGAGT TGTGTTTCCC CAGTCTCGGG GTGCTTGTTT CGGGCGGGCA TTCGCAATTG
TATGCCCTCA ACAGCCCGAC AGAGGCCACG ATGCTCGGCT CGACCCTGGA TGACGCGGCG
GGTGAAGCCT TTGACAAGCT GGCGAAACTC CTTAATCTTC CGTATCCCGG CGGCAAGCAC
ATCGATGAGT TGGGAGCGCT TGGTGTCCCG GATCCGGAAC TTTTGCCCAT CCCCTACGTG
GACAACCGCA ATCTGGATTT CAGTTTCAGC GGGTTGAAGA CGGCGGCGGC CCAGCACATC
CAGCGCCACC CGGACCTGCG GCTGCCCGCT ATGCCCGACG TGGACGAGGT GACCGAAATC
GGGCGGCAGC GGCCCGAGCT GAGCCGGCTG TGTGCTTCGT TCAACCACGC CGTGGCCCGC
GCCCTGTGCA TCAAGGCCAA GCGGGCCCTG GAGCGGGGCC CTCAGGCCCG GCAACTGATC
GTGGCCGGAG GGGTGGCGGC CAACAGCGCA GTGCGACGGG AGATGGCTTC CCTGGCCCAG
GAGATGGGTG TTGAACTTGT CTTGCCGTCG CTGTCCTTGT GTACGGATAA TGCGGCGATG
GTGGCCTATA CCGGAGCCTT GTTCGCTGAG GCCGGACTGG GGCATGATCT CGATCTCGAA
GCGGTCCCGC GGGGGCGGCA ACTGCCTTGG GATTATTGTC GATTCCCGAA CGCCGAAGCG
AGTTGA
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| Protein sequence | MRVLGIETSC DETGLAVVEE GQLIAQELAT QGAMHSVFGG VVPELASREH LRVLDPLWQS
LLQRTGLAPE DFDVVAVARG PGLLGSLLVG LGFAKGLALA TGARLIGVNH LLGHLLAPGL
ERELCFPSLG VLVSGGHSQL YALNSPTEAT MLGSTLDDAA GEAFDKLAKL LNLPYPGGKH
IDELGALGVP DPELLPIPYV DNRNLDFSFS GLKTAAAQHI QRHPDLRLPA MPDVDEVTEI
GRQRPELSRL CASFNHAVAR ALCIKAKRAL ERGPQARQLI VAGGVAANSA VRREMASLAQ
EMGVELVLPS LSLCTDNAAM VAYTGALFAE AGLGHDLDLE AVPRGRQLPW DYCRFPNAEA
S
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