| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1903 |
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| Symbol | |
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| ID | 8419746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2185808 |
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| End bp | 2186641 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645038489 |
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| Product | trehalose-phosphatase |
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| Protein accession | YP_003198765 |
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| Protein GI | 258406023 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.149485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CCCGAGAACG CGATATACAT ACATGGGGCA ACTGGGGCCA GGGGCCTTCT
TTCTGGCGAC GCGTCGCCAA GGCTGACCAG CGGTTGCTGT TGCTGGACTA TGACGGGACC
CTGGCCCCGT TTACTCCGGA GCGGGATCGG GCCTTTCCGT ATCCCGAAGT CCCGGAGCTG
CTCCGGGCGT TGCAACAGGC GGGGCGGACC CGGGTGGTAC TTGTCTCGGG ACGGGAAAGT
TCTGTGGTCG CCAGATTGCT TGGTCTCGAT CCCCCCCCGG AGATCTGGGG CTGTCACGGG
GGCGAACACC TCGCTCCGGA TGGGACGTTG ACGCCGGTCT CGCTCAGCGA CACCCAGCGC
GATGGCCTGC GTCAGGCCGC CGCTCTGGCG GATGAGGCGG GAGCTGGGAC GAACCTGGAG
TATAAACCCG GCTGCGTGGC CTTGCATTGG CGGGGGGCGC AGGAGGCGGG TTTGCGAACA
ACCGCGAACA TGCTACATGA AAATTGGCAA AAGCTGAGCC AGACCTTTGC GCTCGCCCTG
CACCCGTTTG ACGGCGGCCT GGAACTCCGC GCTGCGCATT TGAGTAAGGC CCACGCCGTA
AAAACACTTG TGGCGGAGGT CCCTGCGGCA ACGAGTGCGG CGGCCTATCT CGGGGACGAC
CGGACCGATG AGGATGGTTT CGCTGCCCTG GGAGAGTGCG GCCTTTCGGT TCTGGTGCGA
AAGCAGTGGC GACCGACCCT GGCTTCGTTG TGGCTCGTTC CCCCGGAAGA ATTGCTCCAG
TTCTTACGCC GCTGGCTCCA GGCAGCCCGG CACGGCGACG ATGAGACTAT TTGA
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| Protein sequence | MSDTRERDIH TWGNWGQGPS FWRRVAKADQ RLLLLDYDGT LAPFTPERDR AFPYPEVPEL
LRALQQAGRT RVVLVSGRES SVVARLLGLD PPPEIWGCHG GEHLAPDGTL TPVSLSDTQR
DGLRQAAALA DEAGAGTNLE YKPGCVALHW RGAQEAGLRT TANMLHENWQ KLSQTFALAL
HPFDGGLELR AAHLSKAHAV KTLVAEVPAA TSAAAYLGDD RTDEDGFAAL GECGLSVLVR
KQWRPTLASL WLVPPEELLQ FLRRWLQAAR HGDDETI
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