| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1902 |
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| Symbol | |
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| ID | 8419745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2184215 |
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| End bp | 2185702 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038488 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP- forming) |
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| Protein accession | YP_003198764 |
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| Protein GI | 258406022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.232066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACT CAGACCAGCA ACGTCTCATC GTTGTCTCGA ACCGCCTTCC CATTGCCCTG
AAATGGATGG ACGACCATTG GGAAGTCAAT CCCGGCAGCG GCGGTCTGGT CACGGCCTTG
GCCCCGGTTC TGGGCAAGCG GGGCGGCATC TGGGTCGGCT GGCCCGGGAC GGATGTCGAG
GCCGATGTCT CGGCGCCGTT GGACCGCTTC TCCCGGGAGC AGGGGTATGA TCTGGTCCCG
GTCCCGCTCA GCGCCAGCGA CGTCCAGGGC TATTACGAAG GATTTTCCAA CGCCGTGCTC
TGGCCCCTGT TTCATGATTT CCACACCCAC TGCAATTTCC AGCCCGATTT CTGGCGGACA
TACGAGACGG TCAACAGCCG CTTTGCGGAG CGCATCCAGA GTGTCGCCCG GGACGACGAC
TACATCTGGG TCCACGACTA CCATCTCATG TCCGTGGCCC GGAAGTTGCG GGAAAGCGGC
GGAAAGCGGC AGTGCGGCTT CTTTCTCCAT ATCCCGTTCC CGGCTCCGGA TACCTTCATG
AAACTCCCGT GGCGGCGGGA ATTGGTGCGC GACTTGTTGT CCTTTGACCT CGTCGGCATG
CAGACCCAGC GCGATGTCAG CAATTTTGTC CACGTCATGC GCAGCCTGTG CTCCGACGTG
GAGACCGAAG GGGGACGCAA TTTCCAGCGC GTTTCCTGCG GCCCGTTGTC GACCAAGGTG
GGCGCTTTTC CGATCAGCAT AGATTTCAAC GCCTTTGAAA AGCAGGCCTC CTCACGGGAG
GTTTCCCAAC GCACGGCAAG CCTGAACCGT CTCCACGCCA ACCGGCAGAT CCTTCTCGGC
ATCGACCGAC TGGACTACAC CAAAGGCATC CCGGCCCGGC TTGAAGCCCT GCGCCAGGCC
CTGCTCCATT ACCCGGATCT GCAGGGCAAG ATCTCACTGG TTCAGGTCGT GGTCCCCAGC
CGGGAGCATG TGCCCGAATA CAAGAAGCTC AAGGTCGAGA TCGAGCGCCT GGTCGGCGAA
ATCAACGGTC AATTCACCAC GCCCGGCTGG ATCCCCATCC ACTACCTGTA CCGCAGCCTG
CCCAGGGAAG AACTCATCTC GTTTTATCGC TTTGCGGATA TGGCCCTGGT CACCCCGCTT
CGCGACGGAA TGAACCTGGT GGCCAAGGAG TATTGCGCCT GCAACTACCG CGAGGACGGC
GTCTTGATCC TCAGCGAATT CGCCGGTACG GCCGCCCAGT TTTTCGAGCA CGCGATCCTG
GTCAACCCGT ATGACGTGGA GGGCATGGCC CGGGCCATCC GACAGGGCTA CTATATGCCT
CGGGAAGAGC GGCGCCATCG TATGCGCGCC CTGCGCAATC AAGTCGCCGG CGCGGATATC
CACTGGTGGG TCGACTCGTT TCTGCACGCC ACGGAGCAGG ACCCCAAATC CGGCGGACCG
CTTTCGGTTC AGTCCCTGCA TTATCTGGCC TCAGAGGAGG TGTTTTGA
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| Protein sequence | MSYSDQQRLI VVSNRLPIAL KWMDDHWEVN PGSGGLVTAL APVLGKRGGI WVGWPGTDVE
ADVSAPLDRF SREQGYDLVP VPLSASDVQG YYEGFSNAVL WPLFHDFHTH CNFQPDFWRT
YETVNSRFAE RIQSVARDDD YIWVHDYHLM SVARKLRESG GKRQCGFFLH IPFPAPDTFM
KLPWRRELVR DLLSFDLVGM QTQRDVSNFV HVMRSLCSDV ETEGGRNFQR VSCGPLSTKV
GAFPISIDFN AFEKQASSRE VSQRTASLNR LHANRQILLG IDRLDYTKGI PARLEALRQA
LLHYPDLQGK ISLVQVVVPS REHVPEYKKL KVEIERLVGE INGQFTTPGW IPIHYLYRSL
PREELISFYR FADMALVTPL RDGMNLVAKE YCACNYREDG VLILSEFAGT AAQFFEHAIL
VNPYDVEGMA RAIRQGYYMP REERRHRMRA LRNQVAGADI HWWVDSFLHA TEQDPKSGGP
LSVQSLHYLA SEEVF
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