| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1898 |
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| Symbol | rpsU |
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| ID | 8419741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2181840 |
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| End bp | 2182040 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645038484 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_003198760 |
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| Protein GI | 258406018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0497287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCCGGAG TAATTATCGG AGATCACGAT AACTTTGAGG CTTCCCTGCG CAAATTCAAG
AAGCAGGTGG AGAAGGCCGG CATTCTTTCC GAGCTGAAAA AGCGGCAACA CTATGAAAAG
CCGAGTATTC AGCGCAAGAA GAAAGAAGCT GCTGCGCGCA AGCGCTTGCT GAAGAAGATG
CGCAAAATGC GTCTCCTCTA G
|
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| Protein sequence | MPGVIIGDHD NFEASLRKFK KQVEKAGILS ELKKRQHYEK PSIQRKKKEA AARKRLLKKM
RKMRLL
|
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| |