| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1874 |
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| Symbol | |
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| ID | 8419717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2147054 |
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| End bp | 2147932 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038460 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003198736 |
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| Protein GI | 258405994 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase
[TIGR00683] N-acetylneuraminate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.013061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTC AAGGTGCCTT TACCGCCCTT GTCACCCCCT TCAAAAACGA TCAGGTCGAT
GAAGACGCCT ATCGCAAACT GGTGGAGTGG CAAATAGAGC AGGGTATTGA TGGACTGGTC
CCTTGTGGCA CAACCGGCGA ATCCGCCACG TTATCCCACG AAGAACATAA ACAGGTGATC
AAAATCTGCG TCGACCAGGC CAAGGGACGC GTGCCGGTGT TGGCCGGCGC CGGCTCGAAC
AACACCCGGG AAGCCATCGA CCTGACCCGC TACGCCAAGG AGGCCAAGGC CGATGGCGCC
TTGCTGATCA CTCCCTACTA CAACAAGCCC ACGCCCAATG GGTTGGTGGC CCACTTCAAG
GCCATTGCCC AGGAAGTCTC CATGCCGTTC GTGGTCTACA ATGTTCCCGG CCGCACCGGT
TTGAATGTCC AGGCCCAGAC TATGGCCCGG CTGTTTCATG AAATCCCGGA AGTGGTTGGG
GTCAAAGAGG CCTCCGGGGA TCTCAAACAG ATCGCCGAGG TCGTGGAGGC CTGTGGACCG
GACTTCACCG TCCTCTCCGG TGAGGATTTC ACTGTCTTGC CCTTGCTAGC GGTCGGCGGA
CACGGCGTGA TCTCCGTAAC GTCCAACATC GCGCCCAAAA TGATGTCCGA TATGTGCCGG
GCCTTTCGCG CCGGCGAGCA GAACAAGGCC CTTGGCCTGA GCCTGGAATT GCTGCCGCTC
TGCCGGGGCA TGTTCCTGGA AACCAATCCC ATCCCGGTCA AGACCGCGCT CTCCATGATG
GGCATGATGG ACCTCGAACT CCGCCTGCCC CTGGTCCCGT TGACCCCTGA AAATGAGGCC
GCTCTCAAGG CGCTTCTCAC AGACAAGGGA CTCATTTAG
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| Protein sequence | MQFQGAFTAL VTPFKNDQVD EDAYRKLVEW QIEQGIDGLV PCGTTGESAT LSHEEHKQVI
KICVDQAKGR VPVLAGAGSN NTREAIDLTR YAKEAKADGA LLITPYYNKP TPNGLVAHFK
AIAQEVSMPF VVYNVPGRTG LNVQAQTMAR LFHEIPEVVG VKEASGDLKQ IAEVVEACGP
DFTVLSGEDF TVLPLLAVGG HGVISVTSNI APKMMSDMCR AFRAGEQNKA LGLSLELLPL
CRGMFLETNP IPVKTALSMM GMMDLELRLP LVPLTPENEA ALKALLTDKG LI
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