Gene Dret_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1870 
Symbol 
ID8419713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2144561 
End bp2144836 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content50% 
IMG OID645038456 
Producthistone family protein DNA-binding protein 
Protein accessionYP_003198732 
Protein GI258405990 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00502599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAA GCGAGTTGGT CAAAGCATTG GCCGATGCCC ACAATCTGAC CCAGGAAGAA 
GCCAAAGACA TGGTCAACAC CTTCTTTGAC TCCATCAAAG ATGCCCTCGA GCAGGGGGAC
CGGGTCGAGA TCCGAGGTTT TGGCAGTTTC AAGATCAAAC ATTACGAAGG GTATAAAGGA
CGCAACCCCA AAACAGGGGA AGTGGTAGAC GTCCAACCAA AGCGACTCCC GTTTTTCAGA
GCCGGAAAAG GGCTCAAGGA GCATCTCAAT AAATGA
 
Protein sequence
MNKSELVKAL ADAHNLTQEE AKDMVNTFFD SIKDALEQGD RVEIRGFGSF KIKHYEGYKG 
RNPKTGEVVD VQPKRLPFFR AGKGLKEHLN K