| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1856 |
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| Symbol | |
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| ID | 8419697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2128183 |
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| End bp | 2129169 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038440 |
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| Product | chaperone DnaJ domain protein |
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| Protein accession | YP_003198718 |
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| Protein GI | 258405976 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000127856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0651455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACA AGGACTACTA TGACGTGCTG GGTGTTGACC GCAACGCCTC GCAGGACGAG
ATCAACAAGG CGTTCAAAAA ACTGGCGCGC AAATACCATC CGGACTTGAA CCCTGACGAT
CAAGAGGCGG AGCGGAAATT CAAGGAGGCC AACGAGGCCT ACGAGGTCTT GAAAGACCCT
GAAAAACGCA AACGCTACGA CCACCTCGGA GCCAACTGGG AACACGGTCA GGACTTCGAT
CCCCCGCCGG GCTACGAGAA CATGCATTTC AATTTTGGCG GCGGCCAAGC CGGCGCCGGC
GGATTCAGCG ATTTCTTCGA GACCATTTTC GGGGATATGT TCGGTGGCCG CGCCAATTTC
CAGGGCGGCG GCGGTTTCAG TGGCGGCCAG TTCGGCGGGG CCCAATTCGG CGGACGCGGT
TTTCAGCAAA AAGGCCAGGA CGCCGAGGCC ACCCTCGATC TGAACCTGGA GGACGCCTAC
GCCGGTGGGC AGAAAACCGT CACCCTGCAG GAGCAGGTGC CCGGACCGGA CGGGCGCGTC
CGGGTCCAAC CGAAGACGCT GCAAGTCAAT ATCCCGGCCG GGGTCAAGGA TGGCGCCCGG
ATACGGCTCT CAGGACAGGG GCACCCCGGT CCCGGCGGAG GTCCCAACGG AGATCTTTTT
CTCAAGGTCC ACCTCCGGCC GCACCACCAG TTCAAGGTCG AAGGCAGCAC CATCATTTAC
GACCTGCCCT TGGCGCCCTG GGAGGCCGCG CTCGGAGCCA AGGTCCGCGT CCCGACCCTG
GAAGGGCAGG TGGAAATGCA TATCCCCGCT GGCGTCGGAA GTGGGCAAAA ACTCCGTTTG
CGCGGTCGCG GCCTGGGACG GGGACAAAAA AAGGGTGACC AGATGGTCCG GGTCATGATC
AAAGTCCCCA AGCAGGTCTC GGAAGAAGAA AAAGCGCTCT GGGAACAGCT CGCGACGCAG
TCCAGCTTCA ACCCGCGCAA TTCCTGA
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| Protein sequence | MQYKDYYDVL GVDRNASQDE INKAFKKLAR KYHPDLNPDD QEAERKFKEA NEAYEVLKDP
EKRKRYDHLG ANWEHGQDFD PPPGYENMHF NFGGGQAGAG GFSDFFETIF GDMFGGRANF
QGGGGFSGGQ FGGAQFGGRG FQQKGQDAEA TLDLNLEDAY AGGQKTVTLQ EQVPGPDGRV
RVQPKTLQVN IPAGVKDGAR IRLSGQGHPG PGGGPNGDLF LKVHLRPHHQ FKVEGSTIIY
DLPLAPWEAA LGAKVRVPTL EGQVEMHIPA GVGSGQKLRL RGRGLGRGQK KGDQMVRVMI
KVPKQVSEEE KALWEQLATQ SSFNPRNS
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