| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1853 |
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| Symbol | |
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| ID | 8419694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2124645 |
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| End bp | 2126711 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038437 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_003198715 |
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| Protein GI | 258405973 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000204486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.40293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACCC CGCTTTTCCA AGATCTGATC CTGATTTGCG GCCTTTCAGT GGCGAGCATC
TGGCTTTTCA CCAGATTGCG TCTGCCACCG CTGGTCGGAT TTCTGCTGGC CGGTATCCTG
GTTGGTCCCC ACGGCTTCGG TTGGGTCCGT TCAGGGCATG AAGTGGAGCT TTTGGCCGAA
ATCGGGGTCA TCCTGCTCTT GTTCACCATC GGCCTTGAGT TTTCCCTGGA ACGGTTGATG
CGTATCAAAC GGGCAGTGCT CTTGGGAGGG AGCGTTCAAT TGGTGGTGAC AGCAGTGGTG
GTGACCTTGC TGTCAGCATG GGGCGGGCTC AAACTCAATC AGGCTGTTTT TTTCGGTCTG
GCCATCGCTT TGAGCAGTAC GGCGATTGTG CTCAAAGTGT TGCAGGAAAA GTCCTGGCTG
GAGACGCCGC ACGGGCAGTC CATCCTGGGC ATGCTCATCT TTCAGGATAT CGCGGTGGTG
CCCATCCTGC TCTCGGTCCA GATCCTGGGC GGGTCGGAAC CGCTTACCGC GGGGGGATTG
GGGCTTTTAC TGCTCAAGAT GGCCGCCGTC CTGGTCGTCA TTTTTTACGG GATCAATTAT
GTGATCCCCA AGCTGTTTCG TTCTGTGGCC CAGACCCAAA ATCGGGAAAT CTTTCTGCTC
TTTGTCATTG TTCTGTGTTT CAGCGTTGCC TGGCTGACGT CGAAAGCCGG ACTTTCCCTG
GCCTTGGGGG GATTTTTGTC CGGGTTGGTC ATTTCCCGTT CGGAGTACAG CCTCCAAGCG
TTAAGCAGTA TCCAGCCGTT TCGAGATGTT TTTACCAGCT TTTTCTTTGT CTCTATCGGC
ATGCTTTTCA ATGTCGGGGC TGTCGTTGCC AACCCGTTGC TGATAGTGGG ATTGGGACTG
GCTGTGTATG CCTTGAAATC GGTCTTGGCA GCCGCTGGGG CGCTGACGTT GCGTCTGCCT
TTGCGCAGCG CTGTTTTCAC CGGGCTGGCT TTGGGGCAGG TGGGCGAGTT TTCCTTTATC
GCCTTGCAGG CCGGTGCAGA AACCGGCTTG GTCGGGGCCC GCCTGTACGA TACCACCCTC
GCCTTTGCTG TGGTGTCGAT GGCGTTGACG CCGTTCGTTA TCGCAGTGGC CCCCCGCCTG
GGCCGTCTGG TGGATCGGAT CTGGCCGCAG TCTTTTGAGG AGGATTCCAG TGACGTCTCC
ATGCGCGACC ATCTCTTGGT GATCGGATTC GGGGTCAGCG GGCGGAATAT GGCCCAAGCA
GCGCGATTCG CGGACATCCC CTATTTGATT TTGGAACTCA ATCCCGTGAC CGTCAGTGAG
CAACAGGCCT TGGGGGTGCC TATCCATTTC GGCGACGCTA CGCAGGCCGG GGTTTTAGAG
CATTTCGGGA TCAAGGGGGC CGCGGTGATG GTCGTGGCGG TCAACGATCC TCAGGCGACG
CGACACATTG TCCAACTGGC AAAAACATTG AATCCGAGCC TGCATCTTAT TGTCCGCACC
CGTTTTGTCG AGGAACTGCC GGCCTTGCGG GCGGTCGGTG CTGATGAGAT CGTTTCCGAA
CAGTATGAGG CTTCCATTGA AATGTTTGCC CGGATACTGG CCCGGTATTC CGTTTCCGTT
GAGGATATCG AACAGGCCGT CGGCATGATT CGGGCCCAGG ATTATGGACT GCTCCGGGGG
CGGCGCCAAA GTAGCGGGAA CATTACCCAT GTCCGCTTGG AGCGTGAGGA AGGCGACGTC
TGTTCCCTGC CGGTAGTTTC GAAATCGCCC GTGTCACAAA TGACACTGGC TCAGACCCAT
TTGTGGACCA CGTATCAAGT AACGGTTGTA GCCATTCAGC GCGAGGGGCG GGTACTGAAC
AATCCAAGGG GGGACGAAGT CCTTTCCGCC GGTGACGAGG TGTATGTCAT CGGGCGTCCC
CAGGACGTGG TCAATGCCTA CCTGACCCTT TTTGTCGCGC CGGGAGAATC AGATGAGCGT
TTTGATCCAG ACCGTTTTAC GGGCCCTGCA TGCCTCAAGG CGTACTTGTC CAAAATGCCG
CCAGATTCAA AAGATCCGGG AACGTAA
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| Protein sequence | MDTPLFQDLI LICGLSVASI WLFTRLRLPP LVGFLLAGIL VGPHGFGWVR SGHEVELLAE
IGVILLLFTI GLEFSLERLM RIKRAVLLGG SVQLVVTAVV VTLLSAWGGL KLNQAVFFGL
AIALSSTAIV LKVLQEKSWL ETPHGQSILG MLIFQDIAVV PILLSVQILG GSEPLTAGGL
GLLLLKMAAV LVVIFYGINY VIPKLFRSVA QTQNREIFLL FVIVLCFSVA WLTSKAGLSL
ALGGFLSGLV ISRSEYSLQA LSSIQPFRDV FTSFFFVSIG MLFNVGAVVA NPLLIVGLGL
AVYALKSVLA AAGALTLRLP LRSAVFTGLA LGQVGEFSFI ALQAGAETGL VGARLYDTTL
AFAVVSMALT PFVIAVAPRL GRLVDRIWPQ SFEEDSSDVS MRDHLLVIGF GVSGRNMAQA
ARFADIPYLI LELNPVTVSE QQALGVPIHF GDATQAGVLE HFGIKGAAVM VVAVNDPQAT
RHIVQLAKTL NPSLHLIVRT RFVEELPALR AVGADEIVSE QYEASIEMFA RILARYSVSV
EDIEQAVGMI RAQDYGLLRG RRQSSGNITH VRLEREEGDV CSLPVVSKSP VSQMTLAQTH
LWTTYQVTVV AIQREGRVLN NPRGDEVLSA GDEVYVIGRP QDVVNAYLTL FVAPGESDER
FDPDRFTGPA CLKAYLSKMP PDSKDPGT
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