Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1845 |
Symbol | |
ID | 8419686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2116967 |
End bp | 2117602 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645038429 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003198707 |
Protein GI | 258405965 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.025211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAC GCCAACAGGA AAAATCACAA CAGACACAAC ACGAGTTAAT GGATGCGGCC CTTGAACTCT TCCGGGCCAA CGGGTTCCAG CATACCAGTA TTGCCGAAAT CACGGACCAC GCTGGCTATG CCAAGGGCAA TTTCTACCGA CACTGGAAAA GCAAAAGCGA ACTCTTTCTC AATATCATGG CCGAACGCCT CCAGTATTAT CGGGGGCAGC GCGAACCCGC TCTGGAAAAG GCCCAAAGCG TCGAAGACGT GACCGAGATC GTCCTGTGTT TTCTGGAGAC CATTATTGAT GACGCAAGCT GGTATAAGGT CTTCCTGGAA TTCACGGTCC ACGCCTTTGA CAATGCCGAG GTCCGCCACA AGCTCAACGA CAGCGAATAT CGGCTCTCCA GCGACCTCTT CACTCAGCTT TTTGCCCCCT TTATCAGCGA CCACGCCAGC GCCCGCAAAC TCGGCGCTCT GGTCACCGCC CTTTTTGAAG GCTTTTTGAT CCACAACGCC CTGGAGACAC AGGTCCTGGA TAAAGAGGAT CTGCGACAAG CCATCCTTGT TCTGACCCGC GCCTATCTCC CGGAATTGGA GACCGCGGCT TGCTCCACCT CAACCCGGAG GACACCGCCA TGCTAG
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Protein sequence | MGKRQQEKSQ QTQHELMDAA LELFRANGFQ HTSIAEITDH AGYAKGNFYR HWKSKSELFL NIMAERLQYY RGQREPALEK AQSVEDVTEI VLCFLETIID DASWYKVFLE FTVHAFDNAE VRHKLNDSEY RLSSDLFTQL FAPFISDHAS ARKLGALVTA LFEGFLIHNA LETQVLDKED LRQAILVLTR AYLPELETAA CSTSTRRTPP C
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