| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1837 |
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| Symbol | |
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| ID | 8419678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2106831 |
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| End bp | 2108465 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038421 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003198699 |
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| Protein GI | 258405957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.980403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGGTA GGTGTGTCCG AGAGCACAAG CACGGCTTCT GGTGTGCCGT TTTCCTCCTC
ATGATCCTGC TGGTGGCCTG GACCACGGCA GAGGCCAACG AGAAGCAAAA GATTCTTGTC
CTGCACTCGT ACCACCAGGG CCTGGAATGG ACAGATAATA TCACCAAAGG GGTCCAGTCG
GTCTTTGAAC CCCTGTATAA CGACTATGAA CTCTATTATT TCTATCTGGA CACCAAGCGC
CATGCCGGGA TCGACTATAT CGAGCGCTGG GAGGGCTTGT TCAGCCAAGT TCTGGACGAC
ACCCCTTTTG ATATCATCAT TTCCTCTGAC AACAACGCCC TGCGGTTTTT GAACGATCGT
TTCGCCGCCG AGCTTGAGGA TACCCCGGTC GTTTTTTGCG GGGTCAACGC CTATGAGCCC
GGCTTGATCG CCAATCTCCA TCAGGTGACC GGCGTGGCCG AGGACACGGA TATCATGGGC
ACCATCAAGG CCATTCAGGC TCTGCAACCG GACCTTGAGC GGCTGGTGTT CCTCAACGAC
CAGACGGTGA CCGGGCGCCG CTCGGAAAAG CTTGTCCAGG AAGTCCTCCC GCGTCTTGAA
CCGGAATTGA CCGTGGAATA CCACAACCAA TTCCGGTTGC GACAGATCCC GGAAATTGTC
TCTGGGTTGG GAAAGGATGA TGCCATTTAT CTGTTGACCT TGAACAGGGA CGCAGACGGG
GAATTCATCT CCTACGCCGA CGGCATCCGG CTGGTTTACG AACACGCCTC AGCTCCGATC
TACGGGTCCT GGAGCTTTTA TCTCGGCAAA GGGTTGGCCG GCGGTCTGAT CACCCGGGGC
TTTGATCAAG GGCGACAGGC CGCCCTGGTG GCCAAGCAGG TCCTGAAGGG GGCGCCCACC
GGGGAGATCC CTGTCCGTCG CAATGCGGCC CAGCGCTACA TTTTTGACTA CAGGGTGCTC
CAGGGGTTCG GTCTTGACCC GGCTGACTGT CCGCCTGGGA GCATGTTTAT TCATAAGCCC
CCCACAACCT GGGAATACAT CCAGCAAAAT CTGCCGTTTG TTATCCTGGT GGGGGCAGTG
GTGGCCCTGT TGTGCCTTTC GCTGGCATTG GCGTTGCGCC AGCGTCGTTT AATGTACTGG
GCCTCGATCA CCGATTCTTT GACCGGCATC TTCAATCGTG AACGGCTGGA CGAGGATATG
GGCCTGCTCA TCCACCGTTG CCACGAGCGT GGCGAGGGGT TTGCGTGCAT TCTGGTCGAT
ATCGACTACT TCAAGACAAT CAACGACACC AAAGGGCATA CGGTGGGCGA TCAGGTCCTG
GTGGAGTTCG CCCGTTTGCT CGCCCAGCAG TCCCGCGGGA CGGACTCTGT CTTTCGCTAC
GGAGGCGAGG AGTTCCTGAT GGTCCTTCCC GGGGCGGATC TGCGCGGGGC TTCGCAGTTG
GCCGAGCGGG TGCGGGCGGC TATCGGAGGC ACCCGATTTG CCGGTGAGAC GCGGCTGTCG
GCCTCGTTCG GGGTGGCTGA ATACCAACTC AGCGACAATT GGGAAGGGCT GCTGTCCCGG
GCGGATACCG CCTTGTATGC GGCGAAGGCG CAGGGCCGCA ATCGGGTGGT TGTCGCTCCG
CACGAAACGG AGTGA
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| Protein sequence | MSGRCVREHK HGFWCAVFLL MILLVAWTTA EANEKQKILV LHSYHQGLEW TDNITKGVQS
VFEPLYNDYE LYYFYLDTKR HAGIDYIERW EGLFSQVLDD TPFDIIISSD NNALRFLNDR
FAAELEDTPV VFCGVNAYEP GLIANLHQVT GVAEDTDIMG TIKAIQALQP DLERLVFLND
QTVTGRRSEK LVQEVLPRLE PELTVEYHNQ FRLRQIPEIV SGLGKDDAIY LLTLNRDADG
EFISYADGIR LVYEHASAPI YGSWSFYLGK GLAGGLITRG FDQGRQAALV AKQVLKGAPT
GEIPVRRNAA QRYIFDYRVL QGFGLDPADC PPGSMFIHKP PTTWEYIQQN LPFVILVGAV
VALLCLSLAL ALRQRRLMYW ASITDSLTGI FNRERLDEDM GLLIHRCHER GEGFACILVD
IDYFKTINDT KGHTVGDQVL VEFARLLAQQ SRGTDSVFRY GGEEFLMVLP GADLRGASQL
AERVRAAIGG TRFAGETRLS ASFGVAEYQL SDNWEGLLSR ADTALYAAKA QGRNRVVVAP
HETE
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