| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1820 |
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| Symbol | |
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| ID | 8419661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2090601 |
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| End bp | 2091386 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038404 |
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| Product | NifC-like ABC-type porter |
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| Protein accession | YP_003198682 |
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| Protein GI | 258405940 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
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| TIGRFAM ID | [TIGR01581] NifC-like ABC-type porter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0980695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCGGC CGGTAAATCT GTTTCGCCTT GTGCTGGTCG CGCTATCGTT CGGCGTGACC
GGCATTTTAG TTTTGGCCAT CGGCTCGTTT TTTGTTGTAG CCGACTGGGC AGAGGTCGGC
CACAACCTCC TCGACCCCAC TTTGCTGGCC TCCTTGCGCC TGTCGCTGTG GACCGCGGCT
TCTTCAGCCC TTTTGGTCAT GCTGTGCGCT TTGCCTATCG GCCTGGCCTT GTCCAGGTAT
GCGTTTCGTG GTCGGGGGCT GGTCAAGGCC GTGGTTGATC TGCCGGTAGC GTTCCCTGAG
CTTGTTCTGG GGCTTTGTCT GTTGCTGTGT TTTGGTAAAA CCCCGGTCGG GAAGTGGCTC
TCGGCCGTCG GCTTGCCGCT TGTTTTTACC AAACAGGGCG TCGTAGCGGC ACAATTTTTT
ACCGCCCTGC CCTATGCCAT CCGGATTATG AAATCGACGT ATGATTTCAT TGATCCCCGG
CTGGAATTCG TTTCGCGGAG CTTGGGCTAT TCCTCGCTGC AGACATTCTG GAACGTGACC
CTGCCGATGG CCAAAAGCGG TCTGGTCGCC GCCGGGGTCA TCAGCTTTGC CCGCTGCCTG
GGGACATTTG GCACTGTGCT CATCTTGGCC GGCGGCAGTG CCGGAAAGAC CGATACCCTG
CCCATCCACC TCTACTTGAA TATCTCCTAC GGCAATCTTT CCCTGGCCAT GACCTCGGGG
ATGGTCCTGA TCGCGGTCGC CTTTGCGGCC ATTTTCCTGT TTGAAAAGAC CGAGGCCCGT
TTATGA
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| Protein sequence | MFRPVNLFRL VLVALSFGVT GILVLAIGSF FVVADWAEVG HNLLDPTLLA SLRLSLWTAA
SSALLVMLCA LPIGLALSRY AFRGRGLVKA VVDLPVAFPE LVLGLCLLLC FGKTPVGKWL
SAVGLPLVFT KQGVVAAQFF TALPYAIRIM KSTYDFIDPR LEFVSRSLGY SSLQTFWNVT
LPMAKSGLVA AGVISFARCL GTFGTVLILA GGSAGKTDTL PIHLYLNISY GNLSLAMTSG
MVLIAVAFAA IFLFEKTEAR L
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