Gene Dret_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1817 
Symbol 
ID8419658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2088062 
End bp2088688 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID645038401 
ProductPhosphoglycerate mutase 
Protein accessionYP_003198679 
Protein GI258405937 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCCA CACATACCCT CTCTATCCTG CGCCATGGCC AACGCCACCA GGACCCTCAA 
TGGCGCTACA CCGGCCAACG CGAGGTCCCG TTGACCGCAG TCGGACGCCG GCAGGCTAAA
GAATGGGCCC CTGTCTTCCA ATCCTGGTCC ATTGCCCCAA TCTGGACCTC GCCCCTCGGT
CGATGCCAGG AGACGGCTCG AATCATTGCA GCGGCCTTGC AGTGCCCCCT GGCTGTCGAG
CCAGCCTTGC TGGAAATCGA CCTCGGCGAC TGGGAAGGGT TGACCCGAGA GGAGGTGCGC
CTGCGCAATC CCGGGGCCTA TGAAGCCCGG GGAAAAAACA TTGCCACCTA CCGCCCTCCC
GGTGGAGAAA GTTTTGCCGA TCTACTCGAG CGGGTCCGTC CCTGGGCCGA AAAGACCCTG
ACCCGCGCTG AGCAAACCGT GGCTGTAAGC CATGCCGGTG TCGTCCGCGT ACTGGCCTGC
TGGGCCCGGA ACGCCCCATT GGAGCGGCTG TTCGACTTCA CCCCCCCTGA GGGCACTATG
ACCATTTTCC ATGCCGACCA CACCGGTATC CATCTGCACG CCCTCGGCCT GTCGGTGCAA
GAATTCACCG CCCGGGGGCT CCAATGA
 
Protein sequence
MRPTHTLSIL RHGQRHQDPQ WRYTGQREVP LTAVGRRQAK EWAPVFQSWS IAPIWTSPLG 
RCQETARIIA AALQCPLAVE PALLEIDLGD WEGLTREEVR LRNPGAYEAR GKNIATYRPP
GGESFADLLE RVRPWAEKTL TRAEQTVAVS HAGVVRVLAC WARNAPLERL FDFTPPEGTM
TIFHADHTGI HLHALGLSVQ EFTARGLQ