Gene Dret_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1815 
Symbol 
ID8419656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2085912 
End bp2086946 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID645038399 
Producthypothetical protein 
Protein accessionYP_003198677 
Protein GI258405935 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACG TTCTTGAACT TATCCACCAT GAACTGCAAA ACAACGCCCC CGTCGTCAGC 
GCGGTCATCC TGTCCAGCAC CGGTTCCACC CCCCGCAGGA CCGGTTCGCG CATGGCCATT
GCCCGGGACG GCCGCAATCA AGGCACTGTT GGCGGAGGAC CGGGAGAGGC CCTGGCCCAG
CGCAAAGCGG CCGAAACCTT TCAGGACAAA TGCCCCTGCA TCCTCCAACT CGACCTCACC
GGGGAGCAGG CCGCGGAGGC TGGCATGATC TGCGGCGGAC GCCAGGACAT CCTGCTTGAA
TACATCGCCC CCACTCAAGA AAATGCAACC TTTTACGGTT CCCTTCTTCA ACGCTGGGAC
AATGGCCAAA GTGCTCTGCT CTACACCGCC TTCACCTCGA ATGGTGCCGA GGTCGGAGAC
CTCTCCCGGG CGCTGGAGAC CGATGGTCTG ACGGCCTCTG CTCCCGTCCA GCTCAAAGAG
ACGGCAAGAA CCAAAGGGGC CCAGACGCGC TTGCCCTTTT TGGTCCACGA GGCGCAGCAC
ACCATTTTGA TCGAACCTTT GCGCCCTTCC GGAACAGTGG TCATCGCCGG AGCAGGACAT
GTAGGGAAAG CGACCGCGGA TTGCGCCGCT CTTGTCGGCT ACGAGACAGT GGTTCTCGAC
GACCGTAAAG AATTCCTCCA CCAGGACCGC TTTCCCCCAA GCACGGTCCG ACACCAATTC
CCTGATTTCG GCCATTGCTT CAACGAGTGT CGCATCACTC CTGAAACCGC TATCGTTATC
GTCACCAGAG GCCATGTCCA CGACAAGACC GTGCTGGATC AGGCCCTGCA GACCCCGGCC
GGATATATCG GGATGATCGG CAGTCGCAAA AAACGCGACG CTATCTATGC GGCATTGATT
GAGGCAGGCT GGGACTGGAA GGATTTGGAG CGGGTCCATT GTCCTATTGG CTTGTCCATC
GGCGCTGACA CTCCGGAGGA AATCGCGGTC AGCATCGTCG GCGAACTCAT TCAGCACCGA
TCTGGAGGCC GTTAG
 
Protein sequence
MRNVLELIHH ELQNNAPVVS AVILSSTGST PRRTGSRMAI ARDGRNQGTV GGGPGEALAQ 
RKAAETFQDK CPCILQLDLT GEQAAEAGMI CGGRQDILLE YIAPTQENAT FYGSLLQRWD
NGQSALLYTA FTSNGAEVGD LSRALETDGL TASAPVQLKE TARTKGAQTR LPFLVHEAQH
TILIEPLRPS GTVVIAGAGH VGKATADCAA LVGYETVVLD DRKEFLHQDR FPPSTVRHQF
PDFGHCFNEC RITPETAIVI VTRGHVHDKT VLDQALQTPA GYIGMIGSRK KRDAIYAALI
EAGWDWKDLE RVHCPIGLSI GADTPEEIAV SIVGELIQHR SGGR